The 2.0 version of rSNPBase

Variant report

Variant rs62010208
Chromosome Location chr15:83783337-83783338
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:83777200-83798400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr15:83777200-83834600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr15:83777600-83786800 Weak transcription H9 Cell Line embryonic stem cell
4 chr15:83777800-83783600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr15:83777800-83798800 Weak transcription HSMMtube muscle
6 chr15:83778000-83784200 Weak transcription GM12878-XiMat blood
7 chr15:83778200-83801600 Weak transcription Primary hematopoietic stem cells blood
8 chr15:83778200-83806400 Weak transcription Dnd41 blood
9 chr15:83778600-83797600 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr15:83778800-83799000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr15:83779400-83812800 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr15:83780000-83810000 Weak transcription Fetal Lung lung
13 chr15:83780600-83798600 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr15:83780800-83783400 Enhancers Adipose Nuclei Adipose
15 chr15:83781000-83808200 Strong transcription Primary neutrophils fromperipheralblood blood
16 chr15:83781000-83808200 Strong transcription Monocytes-CD14+_RO01746 blood
17 chr15:83781200-83827200 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr15:83781400-83790000 Strong transcription Primary monocytes fromperipheralblood blood
19 chr15:83781400-83809800 Weak transcription Brain Substantia Nigra brain
20 chr15:83781800-83783400 Genic enhancers Skeletal Muscle Male skeletal muscle
21 chr15:83781800-83783600 Weak transcription Fetal Stomach stomach
22 chr15:83781800-83784800 Strong transcription Aorta Aorta
23 chr15:83782000-83784400 Strong transcription Fetal Brain Female brain
24 chr15:83782000-83798200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr15:83782000-83798400 Weak transcription Stomach Smooth Muscle stomach
26 chr15:83782000-83825000 Weak transcription Psoas Muscle Psoas
27 chr15:83782200-83783400 Genic enhancers Lung lung
28 chr15:83782200-83798400 Weak transcription Brain Inferior Temporal Lobe brain
29 chr15:83782200-83812400 Weak transcription Muscle Satellite Cultured Cells --
30 chr15:83782400-83783400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
31 chr15:83782400-83783400 Strong transcription Brain Cingulate Gyrus brain
32 chr15:83782400-83786400 Strong transcription Fetal Muscle Leg muscle
33 chr15:83782400-83787400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
34 chr15:83782400-83798600 Weak transcription Placenta Placenta
35 chr15:83782400-83803600 Weak transcription Brain Anterior Caudate brain
36 chr15:83782600-83787200 Strong transcription Primary B cells from cord blood blood
37 chr15:83782600-83787800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr15:83782600-83790200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr15:83782600-83798400 Weak transcription Spleen Spleen
40 chr15:83782600-83833600 Weak transcription Right Ventricle heart
41 chr15:83782800-83783400 Strong transcription Fetal Muscle Trunk muscle
42 chr15:83782800-83783600 Genic enhancers HUVEC blood vessel
43 chr15:83782800-83784600 Strong transcription Brain Germinal Matrix brain
44 chr15:83782800-83785800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
45 chr15:83783000-83789000 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr15:83783000-83794800 Weak transcription HSMM muscle
47 chr15:83783200-83783600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr15:83783200-83783800 Weak transcription Gastric stomach
49 chr15:83783200-83784200 Weak transcription Right Atrium heart
50 chr15:83783200-83787600 Strong transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015