The 2.0 version of rSNPBase

Variant report

Variant rs6603042
Chromosome Location chr15:83678394-83678395
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:83655800-83679200 Weak transcription H9 Cell Line embryonic stem cell
2 chr15:83656200-83679000 Weak transcription Right Ventricle heart
3 chr15:83656400-83679200 Weak transcription Fetal Heart heart
4 chr15:83658000-83679000 Weak transcription Gastric stomach
5 chr15:83665600-83679400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr15:83669200-83678800 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr15:83669200-83679000 Weak transcription Rectal Smooth Muscle rectum
8 chr15:83669400-83678800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr15:83669400-83678800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr15:83669400-83679000 Weak transcription Right Atrium heart
11 chr15:83669600-83679000 Weak transcription Pancreas Pancrea
12 chr15:83670000-83678400 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr15:83671400-83678400 Strong transcription Breast Myoepithelial Primary Cells Breast
14 chr15:83672200-83678600 Strong transcription Primary hematopoietic stem cells short term culture blood
15 chr15:83672200-83678800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr15:83672400-83678600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr15:83672400-83678600 Strong transcription Fetal Muscle Trunk muscle
18 chr15:83672400-83679000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr15:83672400-83679000 Strong transcription Primary T regulatory cells fromperipheralblood blood
20 chr15:83672800-83678400 Strong transcription Fetal Stomach stomach
21 chr15:83673000-83678600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr15:83673000-83678600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr15:83673000-83678800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr15:83673000-83678800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr15:83673000-83678800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr15:83673000-83679000 Strong transcription Fetal Muscle Leg muscle
27 chr15:83673000-83679000 Strong transcription Placenta Placenta
28 chr15:83673200-83679000 Strong transcription Osteobl bone
29 chr15:83673400-83678600 Strong transcription Liver Liver
30 chr15:83673400-83678800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr15:83673400-83679000 Strong transcription Primary T cells fromperipheralblood blood
32 chr15:83673400-83679000 Strong transcription Sigmoid Colon Sigmoid Colon
33 chr15:83673600-83678400 Strong transcription H1 Cell Line embryonic stem cell
34 chr15:83673600-83678400 Strong transcription Primary T cells from cord blood blood
35 chr15:83673600-83678600 Strong transcription Primary T helper cells PMA-I stimulated --
36 chr15:83673600-83678600 Strong transcription Primary T helper cells fromperipheralblood blood
37 chr15:83673600-83678600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
38 chr15:83673600-83678600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr15:83673600-83678600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr15:83673600-83678600 Strong transcription Brain Inferior Temporal Lobe brain
41 chr15:83673600-83678800 Strong transcription Primary T helper 17 cells PMA-I stimulated --
42 chr15:83673600-83679000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr15:83673800-83678600 Strong transcription Cortex derived primary cultured neurospheres brain
44 chr15:83673800-83678800 Strong transcription Primary B cells from peripheral blood blood
45 chr15:83674000-83678600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr15:83674000-83678800 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr15:83674200-83678600 Strong transcription Muscle Satellite Cultured Cells --
48 chr15:83675000-83678400 Strong transcription HSMM muscle
49 chr15:83675000-83678600 Strong transcription Thymus Thymus
50 chr15:83675200-83678400 Strong transcription GM12878-XiMat blood

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Last update: Aug 31, 2015