Variant report

Variant rs62117385
Chromosome Location chr19:53227351-53227352
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53210400-53236600 Weak transcription Psoas Muscle Psoas
2 chr19:53210600-53237200 Weak transcription NHDF-Ad bronchial
3 chr19:53212400-53231000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr19:53214800-53237200 Weak transcription Stomach Mucosa stomach
5 chr19:53215800-53237000 Weak transcription Brain Angular Gyrus brain
6 chr19:53216000-53230000 Weak transcription HSMM muscle
7 chr19:53216400-53230800 Weak transcription Colon Smooth Muscle Colon
8 chr19:53216600-53228200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr19:53216600-53228600 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr19:53216600-53230600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr19:53216800-53236600 Weak transcription Brain Cingulate Gyrus brain
12 chr19:53217400-53228000 Weak transcription Aorta Aorta
13 chr19:53217400-53230200 Weak transcription Small Intestine intestine
14 chr19:53217600-53229800 Weak transcription Brain Substantia Nigra brain
15 chr19:53218800-53228600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr19:53218800-53230000 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr19:53219000-53228400 Weak transcription HSMMtube muscle
18 chr19:53219200-53228600 Weak transcription Stomach Smooth Muscle stomach
19 chr19:53219600-53230000 Weak transcription Primary B cells from cord blood blood
20 chr19:53220600-53231400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
21 chr19:53221000-53237400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr19:53223400-53232200 ZNF genes & repeats Primary monocytes fromperipheralblood blood
23 chr19:53223600-53229600 Strong transcription Primary T helper cells PMA-I stimulated --
24 chr19:53224000-53232400 Strong transcription Primary T helper cells fromperipheralblood blood
25 chr19:53224200-53228600 Weak transcription Left Ventricle heart
26 chr19:53224200-53228600 Weak transcription NHLF lung
27 chr19:53224400-53230000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr19:53224600-53228600 Weak transcription Pancreas Pancrea
29 chr19:53225000-53228600 Weak transcription Ovary ovary
30 chr19:53225000-53236800 Weak transcription Brain Hippocampus Middle brain
31 chr19:53225200-53228000 Weak transcription Lung lung
32 chr19:53225200-53228400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr19:53225200-53228400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
34 chr19:53225200-53228400 Weak transcription Colonic Mucosa Colon
35 chr19:53225200-53228400 Weak transcription Esophagus oesophagus
36 chr19:53225200-53228400 Weak transcription Gastric stomach
37 chr19:53225200-53228400 Weak transcription Right Ventricle heart
38 chr19:53225200-53230000 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr19:53225200-53230600 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr19:53225200-53230600 Weak transcription Fetal Lung lung
41 chr19:53225200-53232400 Strong transcription Primary T cells fromperipheralblood blood
42 chr19:53225200-53236600 Weak transcription Brain Inferior Temporal Lobe brain
43 chr19:53225200-53237000 Weak transcription iPS-18 Cell Line embryonic stem cell
44 chr19:53225200-53237200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr19:53225200-53237200 Weak transcription Pancreatic Islets Pancreatic Islet
46 chr19:53225400-53227800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
47 chr19:53225400-53228400 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr19:53225400-53228600 Weak transcription H1 Cell Line embryonic stem cell
49 chr19:53225400-53230000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr19:53225400-53230600 Weak transcription HUES48 Cell Line embryonic stem cell

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