Variant report

Variant rs62147636
Chromosome Location chr2:72499378-72499379
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:72485200-72501800 Weak transcription HSMMtube muscle
2 chr2:72489200-72508200 Weak transcription Aorta Aorta
3 chr2:72491200-72502200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr2:72496400-72500000 Enhancers Fetal Heart heart
5 chr2:72497200-72503400 Enhancers Fetal Intestine Large intestine
6 chr2:72497400-72500600 Weak transcription Pancreas Pancrea
7 chr2:72497400-72505400 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr2:72498000-72499800 Enhancers Brain Anterior Caudate brain
9 chr2:72498000-72500000 Enhancers Fetal Adrenal Gland Adrenal Gland
10 chr2:72498000-72503000 Enhancers Fetal Intestine Small intestine
11 chr2:72498200-72499600 Enhancers Colon Smooth Muscle Colon
12 chr2:72498200-72499600 Enhancers Small Intestine intestine
13 chr2:72498200-72499800 Enhancers Brain Hippocampus Middle brain
14 chr2:72498200-72500200 Enhancers Fetal Kidney kidney
15 chr2:72498200-72501600 Enhancers Rectal Mucosa Donor 31 rectum
16 chr2:72498200-72502400 Flanking Active TSS A549 lung
17 chr2:72498400-72499400 Enhancers Esophagus oesophagus
18 chr2:72498400-72499400 Enhancers Psoas Muscle Psoas
19 chr2:72498400-72499400 Enhancers Thymus Thymus
20 chr2:72498400-72499600 Enhancers Brain Angular Gyrus brain
21 chr2:72498400-72499600 Enhancers Brain Cingulate Gyrus brain
22 chr2:72498400-72499800 Enhancers Fetal Lung lung
23 chr2:72498400-72501000 Enhancers Breast Myoepithelial Primary Cells Breast
24 chr2:72498400-72502800 Enhancers Duodenum Mucosa Duodenum
25 chr2:72498600-72499400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
26 chr2:72498600-72499400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
27 chr2:72498600-72499400 Enhancers Hela-S3 cervix
28 chr2:72498600-72499600 Enhancers Brain Germinal Matrix brain
29 chr2:72498600-72499800 Enhancers Brain Substantia Nigra brain
30 chr2:72498600-72499800 Enhancers Ovary ovary
31 chr2:72498600-72499800 Enhancers Rectal Mucosa Donor 29 rectum
32 chr2:72498800-72499400 Enhancers HUVEC blood vessel
33 chr2:72498800-72499600 Enhancers Adipose Nuclei Adipose
34 chr2:72498800-72499800 Enhancers Cortex derived primary cultured neurospheres brain
35 chr2:72498800-72499800 Enhancers Liver Liver
36 chr2:72498800-72499800 Enhancers Fetal Stomach stomach
37 chr2:72499000-72499400 Enhancers Fetal Muscle Leg muscle
38 chr2:72499000-72499400 Enhancers Fetal Thymus thymus
39 chr2:72499000-72499400 Enhancers Left Ventricle heart
40 chr2:72499000-72499600 Enhancers Duodenum Smooth Muscle Duodenum
41 chr2:72499000-72499600 Enhancers Right Ventricle heart
42 chr2:72499000-72499600 Enhancers Spleen Spleen
43 chr2:72499000-72499800 Enhancers Brain Inferior Temporal Lobe brain
44 chr2:72499000-72502400 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr2:72499200-72499400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
46 chr2:72499200-72499600 Enhancers Right Atrium heart
47 chr2:72499200-72499800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr2:72499200-72499800 Enhancers Fetal Brain Male brain
49 chr2:72499200-72499800 Enhancers Stomach Mucosa stomach
50 chr2:72499200-72499800 Enhancers NHEK skin

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