The 2.0 version of rSNPBase

Variant report

Variant rs62253723
Chromosome Location chr3:24267611-24267612
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:24239000-24268200 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr3:24251400-24279200 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr3:24252400-24276400 Weak transcription HepG2 liver
4 chr3:24255000-24268000 Weak transcription Brain Anterior Caudate brain
5 chr3:24257400-24274000 Weak transcription Pancreas Pancrea
6 chr3:24262000-24268600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr3:24262200-24283200 Weak transcription Fetal Stomach stomach
8 chr3:24262600-24268600 Weak transcription Lung lung
9 chr3:24262600-24283200 Weak transcription Left Ventricle heart
10 chr3:24263000-24283000 Weak transcription Brain Cingulate Gyrus brain
11 chr3:24263200-24273800 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr3:24264000-24275400 Weak transcription Psoas Muscle Psoas
13 chr3:24264600-24270600 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr3:24264600-24276800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr3:24264800-24268000 Weak transcription Fetal Intestine Large intestine
16 chr3:24264800-24268000 Weak transcription Fetal Intestine Small intestine
17 chr3:24264800-24268600 Weak transcription Liver Liver
18 chr3:24264800-24271000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr3:24264800-24276400 Weak transcription Placenta Amnion Placenta Amnion
20 chr3:24265800-24268200 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr3:24265800-24268400 Enhancers Rectal Smooth Muscle rectum
22 chr3:24265800-24268800 Enhancers Fetal Lung lung
23 chr3:24266000-24268200 Enhancers Colon Smooth Muscle Colon
24 chr3:24266000-24273600 Weak transcription Gastric stomach
25 chr3:24266200-24268000 Enhancers iPS-15b Cell Line embryonic stem cell
26 chr3:24266400-24268400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr3:24266400-24268800 Enhancers Duodenum Smooth Muscle Duodenum
28 chr3:24266600-24268200 Enhancers Stomach Mucosa stomach
29 chr3:24266800-24268200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr3:24266800-24268600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr3:24267000-24268200 Enhancers Stomach Smooth Muscle stomach
32 chr3:24267000-24268600 Weak transcription Adipose Nuclei Adipose
33 chr3:24267000-24271200 Weak transcription Aorta Aorta
34 chr3:24267000-24279000 Weak transcription Brain Angular Gyrus brain
35 chr3:24267000-24283000 Weak transcription Brain Inferior Temporal Lobe brain
36 chr3:24267000-24283800 Weak transcription HUES48 Cell Line embryonic stem cell
37 chr3:24267200-24274200 Weak transcription Skeletal Muscle Female skeletal muscle
38 chr3:24267200-24274600 Weak transcription Esophagus oesophagus
39 chr3:24267200-24276400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr3:24267400-24276400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr3:24267400-24278600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr3:24267600-24268000 Enhancers Pancreatic Islets Pancreatic Islet
43 chr3:24267600-24268200 Enhancers NHLF lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015