The 2.0 version of rSNPBase

Variant report

Variant rs62390274
Chromosome Location chr6:14822495-14822496
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:14809000-14824400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr6:14810800-14823200 Weak transcription H9 Cell Line embryonic stem cell
3 chr6:14812200-14824000 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr6:14814200-14822600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr6:14816400-14824200 Weak transcription iPS-20b Cell Line embryonic stem cell
6 chr6:14816800-14824000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr6:14817000-14824000 Weak transcription HUES48 Cell Line embryonic stem cell
8 chr6:14818000-14823200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr6:14818000-14823400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr6:14818800-14824000 Weak transcription Brain Germinal Matrix brain
11 chr6:14819400-14823200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr6:14819400-14824400 Weak transcription Fetal Heart heart
13 chr6:14819400-14824600 Weak transcription Fetal Intestine Large intestine
14 chr6:14819400-14828400 Weak transcription Colonic Mucosa Colon
15 chr6:14819600-14822800 Weak transcription Adipose Nuclei Adipose
16 chr6:14819600-14824000 Weak transcription Right Atrium heart
17 chr6:14819600-14824000 Weak transcription Right Ventricle heart
18 chr6:14819600-14824200 Weak transcription Left Ventricle heart
19 chr6:14819800-14823400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr6:14820000-14824200 Weak transcription Gastric stomach
21 chr6:14820000-14824200 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr6:14820000-14824400 Weak transcription Duodenum Mucosa Duodenum
23 chr6:14820000-14825000 Weak transcription Fetal Intestine Small intestine
24 chr6:14820200-14824000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr6:14820800-14823000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr6:14820800-14823400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr6:14820800-14825400 Enhancers NHDF-Ad bronchial
28 chr6:14821200-14823800 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr6:14821200-14824200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr6:14821200-14824400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr6:14821200-14826400 Weak transcription Stomach Mucosa stomach
32 chr6:14821400-14824400 Weak transcription Muscle Satellite Cultured Cells --
33 chr6:14822000-14822800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr6:14822000-14824200 Enhancers NHLF lung
35 chr6:14822200-14822600 Enhancers iPS-18 Cell Line embryonic stem cell
36 chr6:14822200-14822800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
37 chr6:14822200-14824200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
38 chr6:14822200-14824200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
39 chr6:14822200-14827800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr6:14822400-14822800 Enhancers Fetal Lung lung
41 chr6:14822400-14822800 Enhancers Pancreas Pancrea
42 chr6:14822400-14823000 Enhancers Fetal Kidney kidney
43 chr6:14822400-14823200 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr6:14822400-14826600 Enhancers Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015