Variant report

Variant	rs62404264
Chromosome Location	chr6:71818796-71818797
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:71812578..71814427-chr6:71817405..71819231,2	K562	blood:

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs11968727	0.96[ASN][1000 genomes]
rs11970526	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12664957	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1418674	0.98[ASN][1000 genomes]
rs1418675	0.99[ASN][1000 genomes]
rs1578729	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs16880779	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1857225	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1935790	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2347920	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4707893	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4707894	0.95[ASN][1000 genomes]
rs55923926	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs56204621	0.96[ASN][1000 genomes]
rs56929754	0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs57444908	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs57661037	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs58129816	0.82[AMR][1000 genomes]
rs58519460	0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs58806922	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs58922847	0.82[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs58989863	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs59091480	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs59180645	0.96[ASN][1000 genomes]
rs59236253	0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs59292204	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60573258	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs60600859	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60969202	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60982113	0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62404273	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62404274	0.95[ASN][1000 genomes]
rs62404276	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62404281	0.82[AMR][1000 genomes]
rs6455405	0.98[ASN][1000 genomes]
rs6936049	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs73498954	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7760147	0.96[ASN][1000 genomes]
rs9446340	0.95[ASN][1000 genomes]
rs9446341	0.96[ASN][1000 genomes]
rs9455329	0.98[ASN][1000 genomes]
rs9455330	0.97[ASN][1000 genomes]
rs9455332	0.96[ASN][1000 genomes]
rs9455334	0.94[ASN][1000 genomes]
rs956822	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs992998	0.97[ASN][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71814600-71818800	Enhancers	Fetal Brain Male	brain
2	chr6:71817600-71819400	Enhancers	Left Ventricle	heart
3	chr6:71817800-71823400	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr6:71817800-71824400	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr6:71818000-71818800	Enhancers	Muscle Satellite Cultured Cells	--
6	chr6:71818000-71818800	Enhancers	Cortex derived primary cultured neurospheres	brain
7	chr6:71818000-71821200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr6:71818000-71824200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr6:71818200-71818800	Enhancers	NH-A	brain
10	chr6:71818200-71819400	Enhancers	Fetal Muscle Leg	muscle
11	chr6:71818200-71824200	Weak transcription	Primary neutrophils fromperipheralblood	blood
12	chr6:71818400-71818800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr6:71818400-71818800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr6:71818400-71818800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
15	chr6:71818600-71818800	Enhancers	Breast Myoepithelial Primary Cells	Breast
16	chr6:71818600-71818800	Enhancers	Brain Substantia Nigra	brain
17	chr6:71818600-71818800	Enhancers	Fetal Thymus	thymus
18	chr6:71818600-71823200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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