Variant report
| Variant | rs7760147 |
|---|---|
| Chromosome Location | chr6:71830136-71830137 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:46)
| rs_ID | r2[population] |
|---|---|
| rs11968727 | 1.00[ASN][1000 genomes] |
| rs11970526 | 0.99[ASN][1000 genomes] |
| rs12662304 | 0.86[CHB][hapmap] |
| rs12664957 | 0.97[ASN][1000 genomes] |
| rs1418674 | 0.86[AMR][1000 genomes];0.98[ASN][1000 genomes] |
| rs1418675 | 0.81[AMR][1000 genomes];0.97[ASN][1000 genomes] |
| rs1578729 | 0.99[ASN][1000 genomes] |
| rs16880779 | 0.97[ASN][1000 genomes] |
| rs1857225 | 0.99[ASN][1000 genomes] |
| rs1935790 | 0.95[ASN][1000 genomes] |
| rs2347920 | 0.99[ASN][1000 genomes] |
| rs4707893 | 0.96[ASN][1000 genomes] |
| rs4707894 | 0.81[AMR][1000 genomes];0.97[ASN][1000 genomes] |
| rs55923926 | 0.99[ASN][1000 genomes] |
| rs56204621 | 1.00[ASN][1000 genomes] |
| rs56929754 | 0.97[ASN][1000 genomes] |
| rs57444908 | 0.99[ASN][1000 genomes] |
| rs57661037 | 0.99[ASN][1000 genomes] |
| rs58519460 | 0.97[ASN][1000 genomes] |
| rs58806922 | 0.99[ASN][1000 genomes] |
| rs58922847 | 0.99[ASN][1000 genomes] |
| rs58989863 | 0.99[ASN][1000 genomes] |
| rs59091480 | 0.99[ASN][1000 genomes] |
| rs59180645 | 1.00[ASN][1000 genomes] |
| rs59236253 | 0.97[ASN][1000 genomes] |
| rs59292204 | 0.99[ASN][1000 genomes] |
| rs60573258 | 0.98[ASN][1000 genomes] |
| rs60600859 | 0.99[ASN][1000 genomes] |
| rs60969202 | 0.99[ASN][1000 genomes] |
| rs60982113 | 0.97[ASN][1000 genomes] |
| rs62404264 | 0.96[ASN][1000 genomes] |
| rs62404273 | 0.99[ASN][1000 genomes] |
| rs62404274 | 0.83[AMR][1000 genomes];0.99[ASN][1000 genomes] |
| rs62404276 | 0.97[ASN][1000 genomes] |
| rs6455405 | 0.96[ASN][1000 genomes] |
| rs6936049 | 0.97[ASN][1000 genomes] |
| rs73498954 | 0.99[ASN][1000 genomes] |
| rs9364137 | 0.87[CHB][hapmap] |
| rs9446340 | 0.97[ASN][1000 genomes] |
| rs9446341 | 1.00[ASN][1000 genomes] |
| rs9455329 | 0.98[ASN][1000 genomes] |
| rs9455330 | 0.99[ASN][1000 genomes] |
| rs9455332 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs9455334 | 0.86[AMR][1000 genomes];0.98[ASN][1000 genomes] |
| rs956822 | 0.96[ASN][1000 genomes] |
| rs992998 | 0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.99[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:71824400-71835400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 2 | chr6:71827800-71832200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
