Variant report

Variant	rs62436022
Chromosome Location	chr6:44709325-44709326
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10807302	0.85[ASN][1000 genomes]
rs10948171	0.88[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs10948172	0.81[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs12197593	0.81[ASN][1000 genomes]
rs12198016	0.88[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs12200892	0.88[AMR][1000 genomes]
rs12202698	0.81[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs12208621	0.85[ASN][1000 genomes]
rs12209944	0.81[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs12215095	0.81[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs12215181	0.85[ASN][1000 genomes]
rs12215971	0.81[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs4644056	0.88[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs529125	0.80[ASN][1000 genomes]
rs59107271	0.85[ASN][1000 genomes]
rs62437973	0.88[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs7349931	0.81[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs755	0.81[AMR][1000 genomes]
rs756	0.84[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs7765371	0.81[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs857601	0.80[ASN][1000 genomes]
rs9463042	0.84[ASN][1000 genomes]
rs9463043	0.81[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs9472365	0.81[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs9472367	0.80[AMR][1000 genomes];0.84[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44705200-44709400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr6:44706600-44710400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr6:44706800-44710400	Weak transcription	Duodenum Mucosa	Duodenum
4	chr6:44707600-44710000	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr6:44707800-44710000	Weak transcription	Fetal Intestine Small	intestine
6	chr6:44708000-44709600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
7	chr6:44708000-44710000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr6:44708000-44710000	Weak transcription	Fetal Intestine Large	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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