Variant report

Variant	rs9472367
Chromosome Location	chr6:44774597-44774598
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:44774069..44776397-chr6:44778868..44780744,2	K562	blood:
2	chr6:44772973..44775332-chr6:44779417..44781667,2	MCF-7	breast:

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10484625	0.86[CEU][hapmap];0.82[EUR][1000 genomes]
rs10484626	0.86[CEU][hapmap]
rs10807302	0.85[ASN][1000 genomes]
rs10948171	0.92[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10948172	0.90[CEU][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10948176	0.90[CEU][hapmap];0.82[EUR][1000 genomes]
rs12190313	0.82[CEU][hapmap]
rs12197593	0.89[ASN][1000 genomes]
rs12198016	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12198308	0.90[CEU][hapmap]
rs12200892	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12202698	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12202704	0.83[EUR][1000 genomes]
rs12208332	0.89[CEU][hapmap]
rs12208605	0.90[CEU][hapmap]
rs12208621	0.92[ASN][1000 genomes]
rs12209944	0.86[CEU][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12210292	0.84[CEU][hapmap]
rs12212190	0.90[CEU][hapmap]
rs12215095	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12215181	0.85[ASN][1000 genomes]
rs12215263	0.86[CEU][hapmap];0.82[EUR][1000 genomes]
rs12215971	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1329711	0.90[CEU][hapmap]
rs17423748	0.90[CEU][hapmap]
rs3997499	0.86[CEU][hapmap]
rs4644056	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs529125	0.90[CEU][hapmap];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs59107271	0.92[ASN][1000 genomes]
rs62436022	0.80[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs62437973	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7349931	0.94[CEU][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs755	0.86[CEU][hapmap];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs756	0.85[CEU][hapmap];0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7765371	0.86[CEU][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs857601	0.89[CEU][hapmap];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs860741	0.82[CEU][hapmap];0.88[ASN][1000 genomes]
rs9367210	0.86[CEU][hapmap]
rs9463042	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9463043	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9472365	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44761800-44776200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr6:44769000-44775400	Weak transcription	Pancreas	Pancrea
3	chr6:44769200-44776000	Weak transcription	Ovary	ovary
4	chr6:44769400-44774600	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr6:44769600-44774600	Weak transcription	Psoas Muscle	Psoas
6	chr6:44772200-44774800	Weak transcription	Brain Cingulate Gyrus	brain
7	chr6:44772200-44775200	Enhancers	Duodenum Mucosa	Duodenum
8	chr6:44772400-44774600	Weak transcription	Sigmoid Colon	Sigmoid Colon
9	chr6:44772600-44776000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr6:44772600-44776800	Weak transcription	Primary T cells from cord blood	blood
11	chr6:44773200-44774600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr6:44773200-44775800	Weak transcription	NH-A	brain
13	chr6:44773200-44776200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
14	chr6:44773400-44775000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr6:44773400-44775200	Enhancers	Fetal Intestine Large	intestine
16	chr6:44773800-44774600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr6:44773800-44774600	Weak transcription	Fetal Intestine Small	intestine
18	chr6:44773800-44776200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr6:44774000-44774800	Weak transcription	Fetal Muscle Leg	muscle
20	chr6:44774400-44775000	Enhancers	Liver	Liver

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