Variant report

Variant	rs62437973
Chromosome Location	chr6:44761978-44761979
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs10456120	0.85[EUR][1000 genomes]
rs10484625	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10484626	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10807302	0.85[ASN][1000 genomes]
rs10948171	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10948172	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10948176	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12190313	0.82[EUR][1000 genomes]
rs12197593	0.89[ASN][1000 genomes]
rs12198016	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12198308	0.81[EUR][1000 genomes]
rs12200892	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12202609	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12202698	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12202704	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12208332	0.85[EUR][1000 genomes]
rs12208621	0.92[ASN][1000 genomes]
rs12209944	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12211922	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12214435	0.83[EUR][1000 genomes]
rs12215095	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12215181	0.85[ASN][1000 genomes]
rs12215263	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12215971	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3997499	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4644056	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs529125	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs59107271	0.92[ASN][1000 genomes]
rs62436022	0.88[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs62436368	0.81[EUR][1000 genomes]
rs62436369	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs62436374	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs62436375	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs62436376	0.85[EUR][1000 genomes]
rs62438018	0.86[EUR][1000 genomes]
rs7349931	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs755	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs756	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7765371	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs857601	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs860741	0.88[ASN][1000 genomes]
rs9367210	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9463042	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9463043	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9472365	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9472367	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44761400-44762000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr6:44761400-44762600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr6:44761600-44762400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr6:44761600-44762600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr6:44761600-44762600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr6:44761800-44776200	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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