The 2.0 version of rSNPBase

Variant report

Variant rs62542708
Chromosome Location chr9:27072428-27072429
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:27024400-27082600 Weak transcription Gastric stomach
2 chr9:27024600-27075800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr9:27024600-27078600 Weak transcription Aorta Aorta
4 chr9:27024600-27079000 Weak transcription Pancreas Pancrea
5 chr9:27024600-27082400 Weak transcription Primary T cells from cord blood blood
6 chr9:27024600-27083400 Weak transcription Left Ventricle heart
7 chr9:27024600-27085000 Weak transcription Brain Cingulate Gyrus brain
8 chr9:27024600-27086800 Weak transcription Right Ventricle heart
9 chr9:27024800-27094800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr9:27025200-27078000 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr9:27025400-27075600 Weak transcription Fetal Muscle Trunk muscle
12 chr9:27038000-27085000 Weak transcription Brain Hippocampus Middle brain
13 chr9:27048800-27076200 Weak transcription Stomach Smooth Muscle stomach
14 chr9:27049400-27072600 Weak transcription Fetal Muscle Leg muscle
15 chr9:27053800-27086800 Weak transcription HSMM muscle
16 chr9:27055200-27087000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr9:27057400-27083000 Weak transcription Liver Liver
18 chr9:27058400-27075200 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr9:27060200-27077000 Weak transcription Primary hematopoietic stem cells blood
20 chr9:27060200-27085400 Weak transcription Adipose Nuclei Adipose
21 chr9:27062200-27074400 Weak transcription Ovary ovary
22 chr9:27062200-27081400 Weak transcription Fetal Intestine Large intestine
23 chr9:27067200-27081200 Weak transcription Spleen Spleen
24 chr9:27068000-27087400 Weak transcription Lung lung
25 chr9:27068200-27079400 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr9:27068600-27075000 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr9:27070200-27080600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr9:27070600-27076000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr9:27072200-27073000 ZNF genes & repeats Fetal Intestine Small intestine
30 chr9:27072200-27087000 Weak transcription Placenta Amnion Placenta Amnion
31 chr9:27072400-27074600 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015