The 2.0 version of rSNPBase

Variant report

Variant rs6439467
Chromosome Location chr3:133926013-133926014
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:133874400-133929400 Weak transcription Placenta Amnion Placenta Amnion
2 chr3:133874600-133933600 Weak transcription Colonic Mucosa Colon
3 chr3:133877600-133935200 Weak transcription Psoas Muscle Psoas
4 chr3:133877800-133950200 Weak transcription Small Intestine intestine
5 chr3:133894800-133935200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr3:133894800-133946800 Weak transcription Pancreas Pancrea
7 chr3:133895000-133950000 Weak transcription H9 Cell Line embryonic stem cell
8 chr3:133895000-133950200 Weak transcription Gastric stomach
9 chr3:133895200-133927200 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr3:133895600-133942800 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr3:133902000-133930400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr3:133903000-133929000 Weak transcription GM12878-XiMat blood
13 chr3:133907800-133927400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr3:133909200-133943000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr3:133911600-133929600 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr3:133911600-133929800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr3:133918000-133930200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr3:133918000-133930400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
19 chr3:133918400-133930400 Strong transcription Primary T helper cells fromperipheralblood blood
20 chr3:133919000-133929800 Weak transcription Right Ventricle heart
21 chr3:133919000-133950600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr3:133919400-133943000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr3:133919600-133930800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr3:133919800-133940200 Weak transcription Esophagus oesophagus
25 chr3:133920000-133940200 Weak transcription Fetal Intestine Small intestine
26 chr3:133920200-133934000 Weak transcription Brain Hippocampus Middle brain
27 chr3:133920200-133938200 Weak transcription Fetal Brain Male brain
28 chr3:133920400-133926400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr3:133920400-133929800 Weak transcription Brain Germinal Matrix brain
30 chr3:133920400-133938600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr3:133920600-133927000 Weak transcription K562 blood
32 chr3:133920600-133929600 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr3:133920600-133932000 Weak transcription Brain Anterior Caudate brain
34 chr3:133920600-133938400 Weak transcription HSMMtube muscle
35 chr3:133920600-133940600 Weak transcription A549 lung
36 chr3:133920800-133927000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr3:133920800-133927200 Weak transcription Fetal Kidney kidney
38 chr3:133920800-133928200 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr3:133920800-133929600 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr3:133920800-133931800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
41 chr3:133920800-133932000 Weak transcription Ovary ovary
42 chr3:133920800-133940600 Weak transcription Thymus Thymus
43 chr3:133920800-133950200 Weak transcription Aorta Aorta
44 chr3:133920800-133950200 Weak transcription Spleen Spleen
45 chr3:133920800-133950600 Weak transcription Hela-S3 cervix
46 chr3:133921200-133926200 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr3:133921200-133926400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr3:133921200-133926600 Weak transcription HSMM muscle
49 chr3:133921200-133926800 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr3:133921200-133929200 Weak transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015