Variant report

Variant	rs6450000
Chromosome Location	chr5:68292197-68292198
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs10035142	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10042265	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10055717	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10755226	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10805425	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs10940191	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs12656917	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12697069	0.89[ASN][1000 genomes]
rs3138743	0.81[AMR][1000 genomes]
rs3922936	0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3922937	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4336313	0.88[ASN][1000 genomes]
rs4373240	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4432834	0.93[ASN][1000 genomes]
rs4443379	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4594812	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4976004	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4976007	0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4976056	0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4976057	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4976058	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4976067	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs4976068	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs5022687	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs5022688	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6449989	0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6873039	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6873113	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6874327	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6874774	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6877507	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6877626	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6877919	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6882278	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6887916	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6888650	0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6894214	0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7446085	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7711962	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7712326	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7712349	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7718238	0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7718531	0.91[ASN][1000 genomes]
rs7729300	0.80[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7732664	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7732834	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7733298	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7733454	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7734105	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9885496	0.89[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:68290400-68292200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr5:68290600-68292200	Enhancers	HMEC	breast
3	chr5:68290800-68292200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr5:68290800-68292200	Enhancers	NHEK	skin
5	chr5:68291600-68292200	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr5:68292000-68296200	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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