The 2.0 version of rSNPBase

Variant report

Variant rs6478039
Chromosome Location chr9:100013357-100013358
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100001200-100017000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr9:100001200-100039400 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr9:100001400-100014000 Weak transcription Primary T cells fromperipheralblood blood
4 chr9:100001400-100017600 Weak transcription Left Ventricle heart
5 chr9:100001400-100017800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr9:100001600-100014000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr9:100001600-100022200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr9:100001600-100037400 Weak transcription Primary T cells from cord blood blood
9 chr9:100002000-100013400 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr9:100002000-100015200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr9:100002000-100016600 Weak transcription Duodenum Mucosa Duodenum
12 chr9:100002000-100016600 Weak transcription Thymus Thymus
13 chr9:100002000-100018000 Weak transcription Fetal Muscle Leg muscle
14 chr9:100002000-100023000 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr9:100002000-100025400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr9:100002000-100037400 Weak transcription Fetal Muscle Trunk muscle
17 chr9:100002000-100037800 Weak transcription Stomach Smooth Muscle stomach
18 chr9:100002000-100038600 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr9:100002000-100038600 Weak transcription Fetal Intestine Large intestine
20 chr9:100002000-100038600 Weak transcription Fetal Intestine Small intestine
21 chr9:100002000-100038800 Weak transcription Primary B cells from peripheral blood blood
22 chr9:100002000-100038800 Weak transcription Ovary ovary
23 chr9:100002000-100038800 Weak transcription Right Ventricle heart
24 chr9:100002000-100039000 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr9:100002000-100039600 Weak transcription Primary hematopoietic stem cells blood
26 chr9:100002000-100039600 Weak transcription Adipose Nuclei Adipose
27 chr9:100002000-100039600 Weak transcription Colon Smooth Muscle Colon
28 chr9:100002000-100039600 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr9:100002000-100040400 Weak transcription Spleen Spleen
30 chr9:100002200-100014600 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr9:100002200-100038800 Weak transcription Liver Liver
32 chr9:100002200-100039400 Weak transcription Primary T helper cells PMA-I stimulated --
33 chr9:100002200-100039400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr9:100002400-100037400 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr9:100003200-100017600 Weak transcription Dnd41 blood
36 chr9:100009200-100015800 Weak transcription Psoas Muscle Psoas
37 chr9:100010000-100015800 Weak transcription Esophagus oesophagus
38 chr9:100010600-100039400 Weak transcription Brain Hippocampus Middle brain
39 chr9:100010800-100018000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr9:100011000-100015000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr9:100011400-100015200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr9:100011600-100022400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr9:100011600-100038800 Weak transcription Fetal Stomach stomach
44 chr9:100011600-100039600 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr9:100013000-100040400 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015