Variant report

No.	Distal block	Cell Line	Cell type
1	chr11:23712261..23714812-chr11:23726962..23729358,2	K562	blood:
2	chr11:23711821..23714725-chr11:23720399..23722381,2	K562	blood:
3	chr11:23713225..23715504-chr11:23720246..23721899,2	K562	blood:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10741989	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10741991	0.80[EUR][1000 genomes]
rs10767103	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10767107	0.84[EUR][1000 genomes]
rs10767108	0.84[EUR][1000 genomes]
rs10834167	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10834169	0.81[EUR][1000 genomes]
rs10834170	0.80[EUR][1000 genomes]
rs10834174	0.80[EUR][1000 genomes]
rs11027442	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11027447	0.83[EUR][1000 genomes]
rs11027460	0.81[EUR][1000 genomes]
rs11602457	0.81[EUR][1000 genomes]
rs4244504	0.84[EUR][1000 genomes]
rs4620716	0.82[EUR][1000 genomes]
rs4922664	0.81[EUR][1000 genomes]
rs4922665	0.82[EUR][1000 genomes]
rs4923121	0.80[EUR][1000 genomes]
rs6483979	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7101422	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7123134	0.82[EUR][1000 genomes]
rs72873434	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7924562	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7943102	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv553757	chr11:23564329-23896729	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv469942	chr11:23677246-23723766	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv897062	chr11:23687928-24031627	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv916840	chr11:23710275-24064119	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:23712000-23714000	Weak transcription	HUES6 Cell Line	embryonic stem cell
2	chr11:23712400-23714000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr11:23713200-23714400	Enhancers	Dnd41	blood
4	chr11:23713600-23714200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr11:23713600-23714600	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr11:23713600-23714600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
7	chr11:23713800-23714600	Enhancers	HUES64 Cell Line	embryonic stem cell
8	chr11:23713800-23714600	Enhancers	iPS-20b Cell Line	embryonic stem cell

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