Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10741989	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs10767103	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10767107	0.83[EUR][1000 genomes]
rs10767108	0.83[EUR][1000 genomes]
rs10834167	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs10834168	0.80[EUR][1000 genomes]
rs10834169	0.81[EUR][1000 genomes]
rs10834174	0.81[EUR][1000 genomes]
rs11027442	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11027447	0.82[EUR][1000 genomes]
rs11602457	0.81[EUR][1000 genomes]
rs4244504	0.83[EUR][1000 genomes]
rs4620716	0.81[EUR][1000 genomes]
rs4630297	0.80[EUR][1000 genomes]
rs4922665	0.81[EUR][1000 genomes]
rs6483978	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6483979	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7123134	0.81[EUR][1000 genomes]
rs72873434	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7924562	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7943102	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv553757	chr11:23564329-23896729	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv469942	chr11:23677246-23723766	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv897062	chr11:23687928-24031627	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:23704400-23708000	Enhancers	Dnd41	blood
2	chr11:23706600-23709400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr11:23706800-23707200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood

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