Variant report

Variant	rs650060
Chromosome Location	chr10:117121715-117121716
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10787567	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10787573	0.91[CHB][hapmap]
rs11197173	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11498596	0.81[CEU][hapmap];0.90[CHB][hapmap];0.93[JPT][hapmap];0.86[EUR][1000 genomes]
rs12253499	0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1264764	0.81[CEU][hapmap];0.85[CHB][hapmap];0.87[JPT][hapmap]
rs1264770	0.81[CEU][hapmap];0.85[CHB][hapmap];0.93[JPT][hapmap]
rs1264773	0.81[CEU][hapmap];0.95[CHB][hapmap];0.87[JPT][hapmap]
rs1494174	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1565833	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1615076	0.82[CEU][hapmap];0.95[CHB][hapmap];0.94[JPT][hapmap]
rs2165988	0.81[CEU][hapmap];0.95[CHB][hapmap];0.93[JPT][hapmap];0.80[EUR][1000 genomes]
rs2201363	0.81[CEU][hapmap];0.95[CHB][hapmap];0.93[JPT][hapmap];0.85[EUR][1000 genomes]
rs2256563	0.82[CEU][hapmap];0.82[CHB][hapmap];0.81[JPT][hapmap]
rs2485966	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2485968	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2485971	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs584030	0.90[CHB][hapmap];0.82[YRI][hapmap]
rs594160	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs615905	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs649292	1.00[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap]
rs675816	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs679986	0.90[CHB][hapmap]
rs683117	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs703352	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9630104	0.84[EUR][1000 genomes]
rs9630105	0.82[CEU][hapmap];0.91[CHB][hapmap];0.94[JPT][hapmap];0.85[EUR][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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