Variant report
| Variant | rs6502590 |
|---|---|
| Chromosome Location | chr17:17290702-17290703 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr17:17285800-17290800 | Weak transcription | Hela-S3 | cervix |
| 2 | chr17:17287600-17292400 | Enhancers | Fetal Muscle Leg | muscle |
| 3 | chr17:17287600-17292600 | Enhancers | Fetal Muscle Trunk | muscle |
| 4 | chr17:17289000-17291800 | Enhancers | Fetal Intestine Small | intestine |
| 5 | chr17:17289000-17292000 | Enhancers | Fetal Intestine Large | intestine |
| 6 | chr17:17289200-17291400 | Enhancers | Pancreatic Islets | Pancreatic Islet |
| 7 | chr17:17289200-17292000 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 8 | chr17:17289600-17291000 | Weak transcription | Placenta | Placenta |
| 9 | chr17:17289600-17291200 | Enhancers | Placenta Amnion | Placenta Amnion |
| 10 | chr17:17289600-17291400 | Enhancers | Stomach Mucosa | stomach |
| 11 | chr17:17289600-17292000 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 12 | chr17:17289800-17291000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 13 | chr17:17289800-17291000 | Weak transcription | Left Ventricle | heart |
| 14 | chr17:17289800-17291200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 15 | chr17:17289800-17291600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 16 | chr17:17289800-17292000 | Enhancers | HMEC | breast |
| 17 | chr17:17289800-17293400 | Weak transcription | Dnd41 | blood |
| 18 | chr17:17290000-17291000 | Weak transcription | Fetal Stomach | stomach |
| 19 | chr17:17290000-17291000 | Weak transcription | Right Ventricle | heart |
| 20 | chr17:17290000-17291400 | Weak transcription | Right Atrium | heart |
| 21 | chr17:17290000-17291600 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 22 | chr17:17290000-17291600 | Enhancers | NHEK | skin |
| 23 | chr17:17290000-17292000 | Enhancers | Spleen | Spleen |
| 24 | chr17:17290000-17292200 | Enhancers | Pancreas | Pancrea |
| 25 | chr17:17290000-17292400 | Bivalent Enhancer | Skeletal Muscle Male | skeletal muscle |
| 26 | chr17:17290200-17291200 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 27 | chr17:17290200-17291200 | Weak transcription | Fetal Lung | lung |
| 28 | chr17:17290200-17291600 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 29 | chr17:17290400-17290800 | Weak transcription | Brain Anterior Caudate | brain |
| 30 | chr17:17290400-17291000 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 31 | chr17:17290400-17291200 | Weak transcription | Fetal Brain Female | brain |
| 32 | chr17:17290600-17290800 | Bivalent Enhancer | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 33 | chr17:17290600-17290800 | Enhancers | Esophagus | oesophagus |
| 34 | chr17:17290600-17291200 | Bivalent Enhancer | HepG2 | liver |
| 35 | chr17:17290600-17291600 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 36 | chr17:17290600-17291800 | Enhancers | GM12878-XiMat | blood |
| 37 | chr17:17290600-17292000 | Weak transcription | Brain Germinal Matrix | brain |
| 38 | chr17:17290600-17292000 | Enhancers | Fetal Thymus | thymus |
