The 2.0 version of rSNPBase

Variant report

Variant rs6584002
Chromosome Location chr10:97253512-97253513
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97237200-97254000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr10:97239600-97260800 Weak transcription Brain Germinal Matrix brain
3 chr10:97241000-97260600 Weak transcription Fetal Muscle Trunk muscle
4 chr10:97241400-97253600 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr10:97241600-97254000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr10:97241600-97260400 Weak transcription Fetal Brain Male brain
7 chr10:97241600-97260600 Weak transcription Fetal Stomach stomach
8 chr10:97241800-97256400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr10:97242000-97253800 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr10:97242000-97256400 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr10:97242800-97256000 Weak transcription Fetal Muscle Leg muscle
12 chr10:97245400-97259200 Weak transcription Brain Substantia Nigra brain
13 chr10:97245400-97264600 Weak transcription Ovary ovary
14 chr10:97245800-97254000 Weak transcription Brain Inferior Temporal Lobe brain
15 chr10:97245800-97259400 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr10:97246200-97256600 Weak transcription Brain Cingulate Gyrus brain
17 chr10:97246400-97256000 Weak transcription HSMMtube muscle
18 chr10:97247400-97259800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr10:97249400-97261200 Weak transcription Fetal Brain Female brain
20 chr10:97249800-97274000 Weak transcription Spleen Spleen
21 chr10:97250000-97258800 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr10:97251000-97253600 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr10:97251200-97254000 Weak transcription H1 Cell Line embryonic stem cell
24 chr10:97251200-97268200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr10:97252200-97253800 Genic enhancers Breast Myoepithelial Primary Cells Breast
26 chr10:97252200-97254200 Enhancers Stomach Mucosa stomach
27 chr10:97252200-97254400 Enhancers Right Ventricle heart
28 chr10:97252200-97254600 Enhancers Brain Angular Gyrus brain
29 chr10:97252200-97254600 Enhancers Gastric stomach
30 chr10:97252200-97254600 Enhancers Pancreas Pancrea
31 chr10:97252200-97255600 Enhancers Fetal Heart heart
32 chr10:97252200-97255600 Enhancers Left Ventricle heart
33 chr10:97252400-97254400 Enhancers Right Atrium heart
34 chr10:97252400-97254400 Enhancers Skeletal Muscle Female skeletal muscle
35 chr10:97252400-97254600 Enhancers Psoas Muscle Psoas
36 chr10:97252400-97254600 Genic enhancers Stomach Smooth Muscle stomach
37 chr10:97252400-97255200 Enhancers K562 blood
38 chr10:97252400-97262000 Weak transcription Fetal Lung lung
39 chr10:97252600-97253800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr10:97252600-97253800 Enhancers HUVEC blood vessel
41 chr10:97252600-97254800 Enhancers Colon Smooth Muscle Colon
42 chr10:97252600-97259200 Weak transcription Liver Liver
43 chr10:97252800-97253600 Weak transcription Aorta Aorta
44 chr10:97252800-97253600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr10:97253000-97254400 Genic enhancers Fetal Intestine Small intestine
46 chr10:97253200-97253600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr10:97253200-97254200 Enhancers Fetal Intestine Large intestine
48 chr10:97253200-97254400 Enhancers Lung lung
49 chr10:97253200-97254400 Enhancers Skeletal Muscle Male skeletal muscle
50 chr10:97253200-97254600 Enhancers Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015