Variant report

Variant	rs66471927
Chromosome Location	chr14:69710257-69710258
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69615656..69619747-chr14:69707327..69710862,3	MCF-7	breast:
2	chr14:69708308..69710896-chr14:69926995..69929013,2	MCF-7	breast:
3	chr14:69710167..69713141-chr14:69863978..69866922,3	MCF-7	breast:
4	chr14:69709484..69712204-chr14:69733458..69735206,2	K562	blood:

Variant related genes	Relation type
ENSG00000139990	Chromatin interaction
ENSG00000029364	Chromatin interaction
ENSG00000100632	Chromatin interaction

rs_ID	r²[population]
rs11620883	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11621144	1.00[ASN][1000 genomes]
rs11623999	0.98[EUR][1000 genomes]
rs2877537	1.00[ASN][1000 genomes]
rs4389087	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs45577339	1.00[EUR][1000 genomes]
rs55714609	0.82[EUR][1000 genomes]
rs55836617	0.82[EUR][1000 genomes]
rs56017572	1.00[ASN][1000 genomes]
rs56270411	0.82[EUR][1000 genomes]
rs58761612	0.83[EUR][1000 genomes]
rs59186728	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7144704	0.85[EUR][1000 genomes]
rs72720275	0.82[EUR][1000 genomes]
rs72720276	0.82[EUR][1000 genomes]
rs72720277	0.82[EUR][1000 genomes]
rs72720278	0.82[EUR][1000 genomes]
rs72720280	0.82[EUR][1000 genomes]
rs72720285	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72720290	1.00[ASN][1000 genomes]
rs73282617	0.85[AFR][1000 genomes]
rs8008141	1.00[EUR][1000 genomes]

Chromatin state (count:95 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69660600-69717200	Weak transcription	Hela-S3	cervix
2	chr14:69694000-69711200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr14:69694000-69721400	Weak transcription	HUVEC	blood vessel
4	chr14:69694000-69726000	Weak transcription	Right Atrium	heart
5	chr14:69701600-69714000	Weak transcription	HSMM	muscle
6	chr14:69703400-69711000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
7	chr14:69703400-69719600	Weak transcription	HMEC	breast
8	chr14:69704800-69713200	Weak transcription	NHEK	skin
9	chr14:69704800-69714600	Weak transcription	Muscle Satellite Cultured Cells	--
10	chr14:69704800-69716600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr14:69704800-69725800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr14:69705000-69711800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr14:69705000-69713800	Weak transcription	Pancreatic Islets	Pancreatic Islet
14	chr14:69705200-69710800	Weak transcription	H9 Cell Line	embryonic stem cell
15	chr14:69705200-69711800	Weak transcription	Fetal Kidney	kidney
16	chr14:69705200-69716200	Weak transcription	Primary B cells from peripheral blood	blood
17	chr14:69705400-69711600	Weak transcription	Primary B cells from cord blood	blood
18	chr14:69705600-69714600	Weak transcription	Fetal Thymus	thymus
19	chr14:69706000-69710800	Weak transcription	GM12878-XiMat	blood
20	chr14:69706000-69712000	Weak transcription	HepG2	liver
21	chr14:69706000-69716200	Weak transcription	HSMMtube	muscle
22	chr14:69706000-69722600	Weak transcription	Cortex derived primary cultured neurospheres	brain
23	chr14:69706200-69713800	Weak transcription	Osteobl	bone
24	chr14:69706200-69716600	Weak transcription	Brain Substantia Nigra	brain
25	chr14:69707200-69715000	Weak transcription	Fetal Brain Male	brain
26	chr14:69707200-69716400	Weak transcription	Psoas Muscle	Psoas
27	chr14:69707800-69714000	Weak transcription	Fetal Lung	lung
28	chr14:69707800-69717000	Weak transcription	Right Ventricle	heart
29	chr14:69707800-69717200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
30	chr14:69707800-69717400	Weak transcription	Colonic Mucosa	Colon
31	chr14:69708000-69711400	Weak transcription	Primary neutrophils fromperipheralblood	blood
32	chr14:69708000-69714400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
33	chr14:69708000-69717200	Weak transcription	Lung	lung
34	chr14:69708200-69717200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
35	chr14:69708400-69711600	Weak transcription	Monocytes-CD14+_RO01746	blood
36	chr14:69708400-69713800	Weak transcription	Ovary	ovary
37	chr14:69708400-69721800	Weak transcription	Fetal Brain Female	brain
38	chr14:69708400-69725800	Weak transcription	Pancreas	Pancrea
39	chr14:69708600-69710400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
40	chr14:69708600-69710600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr14:69708600-69710600	Weak transcription	Thymus	Thymus
42	chr14:69708600-69711600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
43	chr14:69708600-69711800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
44	chr14:69708600-69713400	Weak transcription	Primary T cells from cord blood	blood
45	chr14:69708600-69714000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
46	chr14:69708600-69714400	Weak transcription	Aorta	Aorta
47	chr14:69708600-69716000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
48	chr14:69708600-69716400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
49	chr14:69708600-69722000	Weak transcription	Brain Cingulate Gyrus	brain
50	chr14:69708800-69710600	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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