Variant report

Variant	rs8008141
Chromosome Location	chr14:69704662-69704663
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69618405..69621160-chr14:69702714..69704911,2	MCF-7	breast:
2	chr14:69697379..69699453-chr14:69702660..69704964,2	K562	blood:
3	chr14:69700087..69702878-chr14:69704434..69707352,3	K562	blood:

Variant related genes	Relation type
ENSG00000139990	Chromatin interaction
ENSG00000081177	Chromatin interaction

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs1013762	1.00[JPT][hapmap]
rs10498527	1.00[JPT][hapmap]
rs1105625	1.00[JPT][hapmap]
rs11158784	1.00[JPT][hapmap]
rs11158785	1.00[JPT][hapmap]
rs11158786	1.00[JPT][hapmap]
rs11620883	0.88[CEU][hapmap];0.83[TSI][hapmap];0.82[EUR][1000 genomes]
rs11621833	0.88[CEU][hapmap]
rs11623999	0.88[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11626985	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs11627004	1.00[CEU][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs11627476	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.86[ASN][1000 genomes]
rs12147222	0.86[ASN][1000 genomes]
rs1275417	1.00[JPT][hapmap]
rs1710989	1.00[JPT][hapmap]
rs1710990	1.00[JPT][hapmap]
rs1914004	1.00[JPT][hapmap]
rs2001355	1.00[JPT][hapmap]
rs2176255	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.86[ASN][1000 genomes]
rs2331918	1.00[JPT][hapmap]
rs3742905	1.00[CEU][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs4389087	0.88[CEU][hapmap];0.82[EUR][1000 genomes]
rs45577339	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4899280	1.00[JPT][hapmap]
rs4902695	1.00[JPT][hapmap]
rs55714609	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55836617	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56270411	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58761612	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59186728	0.82[EUR][1000 genomes]
rs66471927	1.00[EUR][1000 genomes]
rs7144704	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72718263	1.00[AFR][1000 genomes]
rs72718270	1.00[AFR][1000 genomes]
rs72718279	1.00[AFR][1000 genomes]
rs72720212	0.86[ASN][1000 genomes]
rs72720218	0.86[ASN][1000 genomes]
rs72720275	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72720276	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72720277	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72720278	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72720280	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72720285	0.82[EUR][1000 genomes]
rs72720290	1.00[AFR][1000 genomes]
rs72720298	1.00[ASN][1000 genomes]
rs9323521	1.00[JPT][hapmap]

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69660600-69717200	Weak transcription	Hela-S3	cervix
2	chr14:69677000-69709600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
3	chr14:69678400-69709200	Weak transcription	NHDF-Ad	bronchial
4	chr14:69678600-69709200	Weak transcription	A549	lung
5	chr14:69688600-69707400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
6	chr14:69692800-69708400	Weak transcription	Stomach Mucosa	stomach
7	chr14:69694000-69711200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr14:69694000-69721400	Weak transcription	HUVEC	blood vessel
9	chr14:69694000-69726000	Weak transcription	Right Atrium	heart
10	chr14:69695200-69708800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
11	chr14:69695600-69706000	Strong transcription	HUES64 Cell Line	embryonic stem cell
12	chr14:69695600-69708800	Strong transcription	Liver	Liver
13	chr14:69696400-69708800	Strong transcription	Stomach Smooth Muscle	stomach
14	chr14:69696600-69709600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
15	chr14:69698600-69706600	Weak transcription	Fetal Heart	heart
16	chr14:69698600-69709200	Strong transcription	Brain Angular Gyrus	brain
17	chr14:69698800-69707800	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
18	chr14:69698800-69708000	Strong transcription	Fetal Intestine Large	intestine
19	chr14:69698800-69709200	Strong transcription	Brain Inferior Temporal Lobe	brain
20	chr14:69700200-69709400	Strong transcription	Fetal Stomach	stomach
21	chr14:69700600-69709400	Strong transcription	Fetal Muscle Leg	muscle
22	chr14:69700800-69706000	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr14:69700800-69708600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr14:69700800-69708600	Strong transcription	Adipose Nuclei	Adipose
25	chr14:69700800-69709000	Strong transcription	Primary T helper cells fromperipheralblood	blood
26	chr14:69701000-69705400	Strong transcription	iPS-18 Cell Line	embryonic stem cell
27	chr14:69701000-69708600	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr14:69701000-69708600	Strong transcription	Primary T cells from cord blood	blood
29	chr14:69701000-69709400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr14:69701000-69709400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr14:69701200-69707000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
32	chr14:69701200-69708000	Strong transcription	Lung	lung
33	chr14:69701200-69708800	Strong transcription	HUES48 Cell Line	embryonic stem cell
34	chr14:69701200-69709200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
35	chr14:69701200-69709400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
36	chr14:69701400-69705200	Strong transcription	Primary B cells from peripheral blood	blood
37	chr14:69701400-69705600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
38	chr14:69701400-69705600	Strong transcription	Fetal Thymus	thymus
39	chr14:69701400-69705800	Strong transcription	Ovary	ovary
40	chr14:69701400-69706000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
41	chr14:69701400-69706000	Strong transcription	Primary monocytes fromperipheralblood	blood
42	chr14:69701400-69706000	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
43	chr14:69701400-69706200	Strong transcription	Brain Anterior Caudate	brain
44	chr14:69701400-69706800	Strong transcription	Left Ventricle	heart
45	chr14:69701400-69707800	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
46	chr14:69701400-69707800	Strong transcription	Duodenum Mucosa	Duodenum
47	chr14:69701400-69707800	Strong transcription	Rectal Mucosa Donor 31	rectum
48	chr14:69701400-69708000	Strong transcription	Primary neutrophils fromperipheralblood	blood
49	chr14:69701400-69708000	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
50	chr14:69701400-69708000	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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