Variant report

Variant	rs12147222
Chromosome Location	chr14:69610368-69610369
allele	A/C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:69608197..69610454-chr14:69620173..69622020,3	MCF-7	breast:

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs11626985	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs11627004	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11627476	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1884631	0.83[ASN][1000 genomes]
rs1950712	0.83[ASN][1000 genomes]
rs2176255	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2877521	0.83[ASN][1000 genomes]
rs2877522	0.83[ASN][1000 genomes]
rs2877523	0.83[ASN][1000 genomes]
rs3742905	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs45577339	0.86[ASN][1000 genomes]
rs55714609	0.86[ASN][1000 genomes]
rs55836617	0.86[ASN][1000 genomes]
rs55975366	0.93[EUR][1000 genomes]
rs56097892	0.93[EUR][1000 genomes]
rs56270411	0.86[ASN][1000 genomes]
rs56274826	1.00[EUR][1000 genomes]
rs56868917	1.00[EUR][1000 genomes]
rs58761612	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7144704	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72718286	1.00[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs72718291	1.00[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs72718292	1.00[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs72720212	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72720218	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72720225	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72720241	1.00[AFR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72720275	0.86[ASN][1000 genomes]
rs72720276	0.86[ASN][1000 genomes]
rs72720277	0.86[ASN][1000 genomes]
rs72720278	0.86[ASN][1000 genomes]
rs72720298	0.86[ASN][1000 genomes]
rs8008141	0.86[ASN][1000 genomes]

No data

Chromatin state (count:120 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69583200-69618000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr14:69596600-69612800	Weak transcription	Rectal Mucosa Donor 29	rectum
3	chr14:69596600-69613800	Weak transcription	Primary B cells from peripheral blood	blood
4	chr14:69596600-69614800	Weak transcription	Fetal Brain Female	brain
5	chr14:69596600-69614800	Weak transcription	Fetal Muscle Trunk	muscle
6	chr14:69596600-69615000	Weak transcription	Thymus	Thymus
7	chr14:69596600-69615400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr14:69596600-69615400	Weak transcription	Placenta	Placenta
9	chr14:69596600-69616400	Weak transcription	Primary hematopoietic stem cells	blood
10	chr14:69596600-69617000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr14:69597600-69614000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr14:69600000-69617000	Weak transcription	Brain Cingulate Gyrus	brain
13	chr14:69600200-69611400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
14	chr14:69600400-69611200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
15	chr14:69600400-69614000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr14:69600400-69616800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
17	chr14:69600400-69616800	Weak transcription	Fetal Brain Male	brain
18	chr14:69600600-69617800	Weak transcription	Aorta	Aorta
19	chr14:69601000-69613200	Weak transcription	Primary monocytes fromperipheralblood	blood
20	chr14:69601000-69615600	Weak transcription	HMEC	breast
21	chr14:69601000-69615800	Weak transcription	A549	lung
22	chr14:69601000-69616800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
23	chr14:69601000-69617000	Weak transcription	Ovary	ovary
24	chr14:69601000-69618000	Weak transcription	Esophagus	oesophagus
25	chr14:69601400-69616000	Weak transcription	Hela-S3	cervix
26	chr14:69604800-69611400	Weak transcription	Brain Hippocampus Middle	brain
27	chr14:69604800-69611800	Weak transcription	Pancreas	Pancrea
28	chr14:69604800-69616800	Weak transcription	Stomach Smooth Muscle	stomach
29	chr14:69605000-69616600	Weak transcription	Brain Germinal Matrix	brain
30	chr14:69605200-69614800	Weak transcription	Sigmoid Colon	Sigmoid Colon
31	chr14:69605200-69616800	Weak transcription	Small Intestine	intestine
32	chr14:69605200-69617400	Weak transcription	Primary neutrophils fromperipheralblood	blood
33	chr14:69605400-69615000	Weak transcription	HSMMtube	muscle
34	chr14:69605400-69617000	Weak transcription	Brain Inferior Temporal Lobe	brain
35	chr14:69605400-69617400	Weak transcription	Duodenum Smooth Muscle	Duodenum
36	chr14:69605400-69617600	Weak transcription	Brain Substantia Nigra	brain
37	chr14:69605600-69613800	Weak transcription	HUVEC	blood vessel
38	chr14:69605600-69614000	Weak transcription	HUES48 Cell Line	embryonic stem cell
39	chr14:69605600-69614000	Weak transcription	Fetal Lung	lung
40	chr14:69605600-69614000	Weak transcription	HSMM	muscle
41	chr14:69605600-69615400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
42	chr14:69605600-69615400	Weak transcription	NH-A	brain
43	chr14:69605600-69616000	Weak transcription	Fetal Heart	heart
44	chr14:69605600-69616800	Weak transcription	Rectal Smooth Muscle	rectum
45	chr14:69605600-69617600	Weak transcription	H1 Cell Line	embryonic stem cell
46	chr14:69605600-69617800	Weak transcription	H9 Cell Line	embryonic stem cell
47	chr14:69605800-69611200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
48	chr14:69605800-69613600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
49	chr14:69605800-69613800	Weak transcription	Adipose Nuclei	Adipose
50	chr14:69605800-69614600	Weak transcription	Primary T killer memory cells from peripheral blood	blood

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