Variant report
Variant | rs6652398 |
---|---|
Chromosome Location | chrX:104643107-104643108 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs12115987 | 1.00[MEX][hapmap] |
rs1321386 | 0.83[ASW][hapmap];1.00[MEX][hapmap] |
rs16984676 | 1.00[MEX][hapmap] |
rs16984695 | 1.00[MEX][hapmap] |
rs16984753 | 1.00[MEX][hapmap] |
rs16984771 | 1.00[MEX][hapmap] |
rs16984773 | 1.00[MEX][hapmap] |
rs17003891 | 1.00[MEX][hapmap] |
rs2001044 | 1.00[MEX][hapmap] |
rs5916735 | 1.00[MEX][hapmap] |
rs5962290 | 1.00[MEX][hapmap] |
rs5962539 | 1.00[MEX][hapmap] |
rs5962540 | 1.00[MEX][hapmap] |
rs6418240 | 1.00[MEX][hapmap] |
rs6523836 | 1.00[MEX][hapmap] |
rs6523846 | 1.00[MEX][hapmap] |
rs6621959 | 1.00[MEX][hapmap] |
rs6652926 | 1.00[MEX][hapmap] |
rs7056795 | 0.92[ASW][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];0.86[YRI][hapmap] |
rs7056995 | 1.00[MEX][hapmap] |
rs7057016 | 1.00[YRI][hapmap] |
rs7876119 | 1.00[MEX][hapmap] |
rs7876229 | 1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap] |
rs7877795 | 1.00[MEX][hapmap] |
rs7879161 | 1.00[MEX][hapmap] |
rs7881915 | 1.00[MEX][hapmap] |
rs7886649 | 1.00[MEX][hapmap] |
rs7892424 | 1.00[MEX][hapmap] |
rs9785562 | 1.00[MEX][hapmap] |
rs988214 | 1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap] |
rs988215 | 1.00[YRI][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv432352 | chrX:104346855-104831855 | Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive region | 3 gene(s) | inside rSNPs | diseases |
No data |