Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:56323265..56326203-chr1:56327574..56329306,3	K562	blood:

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10493183	0.97[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs10493185	0.95[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs10493187	0.95[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs10493189	0.86[AFR][1000 genomes]
rs10888940	0.86[AFR][1000 genomes]
rs10888942	0.97[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs10888944	0.82[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs11206673	0.86[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs11206677	0.86[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs12058087	0.85[EUR][1000 genomes]
rs12118218	0.85[EUR][1000 genomes]
rs12119904	0.86[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs12120132	0.95[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs12138137	0.97[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs12563373	0.95[ASN][1000 genomes]
rs12565060	0.95[ASN][1000 genomes]
rs12566744	0.88[ASN][1000 genomes]
rs12569071	0.92[ASN][1000 genomes]
rs17112890	0.82[ASN][1000 genomes]
rs17112921	0.97[ASN][1000 genomes]
rs17113044	0.97[ASN][1000 genomes]
rs3795354	0.97[ASN][1000 genomes]
rs4313435	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4433442	0.81[JPT][hapmap]
rs58186426	0.95[ASN][1000 genomes]
rs61774839	0.86[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs74074547	0.84[ASN][1000 genomes]
rs74074557	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv829926	chr1:56188492-56360745	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56322400-56333400	Weak transcription	Psoas Muscle	Psoas
2	chr1:56325400-56328400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr1:56326000-56331800	Weak transcription	Placenta	Placenta
4	chr1:56326000-56342000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr1:56326600-56331200	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr1:56326600-56333200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr1:56327000-56333600	Weak transcription	Fetal Muscle Leg	muscle
8	chr1:56327200-56332200	Weak transcription	Fetal Intestine Large	intestine
9	chr1:56327600-56329400	Weak transcription	Fetal Intestine Small	intestine

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