The 2.0 version of rSNPBase

Variant report

Variant rs6659096
Chromosome Location chr1:56292073-56292074
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:24 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:56283000-56293000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
2 chr1:56283200-56292400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:56289400-56292800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr1:56289600-56292400 Weak transcription Osteobl bone
5 chr1:56289800-56292200 Weak transcription Muscle Satellite Cultured Cells --
6 chr1:56289800-56292400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr1:56289800-56292600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr1:56289800-56293000 Weak transcription NH-A brain
9 chr1:56290800-56293000 Weak transcription Placenta Amnion Placenta Amnion
10 chr1:56290800-56293800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
11 chr1:56290800-56294000 Enhancers NHDF-Ad bronchial
12 chr1:56290800-56294200 Enhancers NHLF lung
13 chr1:56291000-56292600 Enhancers Colon Smooth Muscle Colon
14 chr1:56291200-56294200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr1:56291200-56294400 Enhancers Placenta Placenta
16 chr1:56291400-56293800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr1:56291600-56294600 Enhancers Breast Myoepithelial Primary Cells Breast
18 chr1:56292000-56292400 Enhancers Fetal Kidney kidney
19 chr1:56292000-56292400 Enhancers Psoas Muscle Psoas
20 chr1:56292000-56293600 Enhancers HSMMtube muscle
21 chr1:56292000-56294000 Enhancers Fetal Stomach stomach
22 chr1:56292000-56294400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
23 chr1:56292000-56294400 Enhancers Hela-S3 cervix
24 chr1:56292000-56296400 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015