The 2.0 version of rSNPBase

Variant report

Variant rs6661910
Chromosome Location chr1:46290632-46290633
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46270000-46299600 Weak transcription Spleen Spleen
2 chr1:46270200-46290800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:46270200-46317000 Weak transcription Gastric stomach
4 chr1:46270400-46299400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:46270400-46300000 Weak transcription Aorta Aorta
6 chr1:46270400-46306600 Weak transcription Ovary ovary
7 chr1:46270400-46309600 Weak transcription Brain Inferior Temporal Lobe brain
8 chr1:46270400-46313400 Weak transcription Small Intestine intestine
9 chr1:46270600-46291600 Weak transcription HSMMtube muscle
10 chr1:46270600-46294600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr1:46270600-46298800 Weak transcription Brain Anterior Caudate brain
12 chr1:46270600-46299200 Weak transcription Placenta Amnion Placenta Amnion
13 chr1:46270600-46305800 Weak transcription Colon Smooth Muscle Colon
14 chr1:46270600-46314000 Weak transcription H1 Cell Line embryonic stem cell
15 chr1:46270800-46291800 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr1:46270800-46306000 Weak transcription Rectal Smooth Muscle rectum
17 chr1:46270800-46307800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr1:46271000-46296800 Weak transcription Stomach Smooth Muscle stomach
19 chr1:46271200-46296000 Weak transcription Primary monocytes fromperipheralblood blood
20 chr1:46271200-46297800 Weak transcription Brain Hippocampus Middle brain
21 chr1:46271400-46291000 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr1:46271400-46291200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:46271400-46291600 Weak transcription Liver Liver
24 chr1:46271400-46309400 Weak transcription Fetal Kidney kidney
25 chr1:46272000-46306800 Weak transcription Fetal Brain Male brain
26 chr1:46273000-46291000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr1:46274600-46291600 Weak transcription HSMM muscle
28 chr1:46274600-46309200 Weak transcription Hela-S3 cervix
29 chr1:46278800-46300400 Weak transcription Primary B cells from cord blood blood
30 chr1:46278800-46306400 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr1:46279400-46295000 Weak transcription Placenta Placenta
32 chr1:46280000-46291600 Weak transcription Lung lung
33 chr1:46281600-46296800 Weak transcription NHEK skin
34 chr1:46281600-46302600 Weak transcription Psoas Muscle Psoas
35 chr1:46281800-46295000 Weak transcription H9 Cell Line embryonic stem cell
36 chr1:46281800-46296200 Weak transcription HMEC breast
37 chr1:46281800-46299200 Weak transcription Muscle Satellite Cultured Cells --
38 chr1:46281800-46306400 Weak transcription NH-A brain
39 chr1:46281800-46309200 Weak transcription NHLF lung
40 chr1:46282000-46291800 Weak transcription Osteobl bone
41 chr1:46282000-46297800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr1:46282000-46298600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr1:46282200-46291800 Weak transcription A549 lung
44 chr1:46282200-46296800 Weak transcription HUVEC blood vessel
45 chr1:46282200-46306400 Weak transcription NHDF-Ad bronchial
46 chr1:46284000-46291000 Weak transcription Fetal Muscle Leg muscle
47 chr1:46284200-46298400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr1:46284400-46291000 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr1:46284600-46293600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr1:46285800-46306200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015