Variant report

Variant rs4545281
Chromosome Location chr1:46360054-46360055
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46342200-46391200 Weak transcription Primary hematopoietic stem cells short term culture blood
2 chr1:46347400-46378400 Weak transcription Brain Germinal Matrix brain
3 chr1:46349600-46369000 Weak transcription Dnd41 blood
4 chr1:46350800-46378800 Weak transcription K562 blood
5 chr1:46356200-46364400 Weak transcription GM12878-XiMat blood
6 chr1:46356200-46365200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr1:46356400-46366200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:46357800-46376600 Weak transcription Psoas Muscle Psoas
9 chr1:46358000-46374400 Weak transcription Fetal Intestine Small intestine
10 chr1:46358400-46361800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr1:46358400-46363200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr1:46358400-46364400 Weak transcription Ovary ovary
13 chr1:46358400-46378200 Weak transcription Right Atrium heart
14 chr1:46358600-46361800 Weak transcription Hela-S3 cervix
15 chr1:46358600-46367200 Weak transcription Liver Liver
16 chr1:46358600-46367400 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr1:46358600-46374400 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr1:46358600-46377600 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr1:46358600-46377600 Weak transcription HSMM muscle
20 chr1:46358800-46362400 Weak transcription Fetal Heart heart
21 chr1:46358800-46367000 Weak transcription HepG2 liver
22 chr1:46359000-46360600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:46359000-46360800 Weak transcription HMEC breast
24 chr1:46359000-46365600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr1:46359200-46378800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:46359400-46360600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr1:46360000-46360400 Enhancers A549 lung

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