Variant report

Variant rs785511
Chromosome Location chr1:46534498-46534499
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46501400-46548200 Weak transcription Aorta Aorta
2 chr1:46503400-46535600 Weak transcription Brain Anterior Caudate brain
3 chr1:46505600-46537600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr1:46506000-46549400 Weak transcription Muscle Satellite Cultured Cells --
5 chr1:46508400-46536200 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr1:46508400-46546600 Weak transcription HSMMtube muscle
7 chr1:46508800-46537400 Weak transcription HMEC breast
8 chr1:46509600-46540200 Weak transcription Spleen Spleen
9 chr1:46510400-46548400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr1:46518200-46551600 Weak transcription Psoas Muscle Psoas
11 chr1:46524000-46538000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr1:46524800-46535400 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr1:46524800-46547000 Weak transcription Lung lung
14 chr1:46525200-46543000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr1:46525400-46548800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr1:46525600-46552600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr1:46527400-46534800 Weak transcription Fetal Stomach stomach
18 chr1:46527600-46535200 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr1:46527600-46536200 Weak transcription H9 Cell Line embryonic stem cell
20 chr1:46527600-46542400 Weak transcription Stomach Smooth Muscle stomach
21 chr1:46527600-46543400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr1:46527800-46535600 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr1:46527800-46537000 Weak transcription Brain Inferior Temporal Lobe brain
24 chr1:46527800-46537600 Weak transcription Brain Germinal Matrix brain
25 chr1:46527800-46537800 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr1:46527800-46543000 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr1:46527800-46546400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr1:46527800-46550400 Weak transcription Fetal Heart heart
29 chr1:46528600-46540200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr1:46528600-46552200 Weak transcription Thymus Thymus
31 chr1:46528800-46535200 Weak transcription Fetal Thymus thymus
32 chr1:46528800-46550400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:46529000-46543200 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr1:46529000-46549800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr1:46529400-46545200 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr1:46529400-46545400 Weak transcription Small Intestine intestine
37 chr1:46531200-46543800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr1:46531400-46535200 Weak transcription Primary B cells from cord blood blood
39 chr1:46531400-46535600 Weak transcription Primary neutrophils fromperipheralblood blood
40 chr1:46531400-46535800 Weak transcription K562 blood
41 chr1:46531400-46536200 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr1:46531400-46543600 Weak transcription Fetal Brain Male brain
43 chr1:46531400-46543600 Weak transcription HSMM muscle
44 chr1:46531400-46543800 Weak transcription Primary T cells from cord blood blood
45 chr1:46531400-46546600 Weak transcription HUVEC blood vessel
46 chr1:46531600-46534800 Weak transcription Primary monocytes fromperipheralblood blood
47 chr1:46531600-46541000 Weak transcription Fetal Intestine Small intestine
48 chr1:46531600-46543000 Weak transcription Fetal Intestine Large intestine
49 chr1:46531800-46534800 Weak transcription Monocytes-CD14+_RO01746 blood
50 chr1:46531800-46547200 Weak transcription Adipose Nuclei Adipose

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