The 2.0 version of rSNPBase

Variant report

Variant rs1707339
Chromosome Location chr1:46513179-46513180
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46475600-46525000 Weak transcription Fetal Kidney kidney
2 chr1:46476600-46515800 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr1:46490200-46524600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:46490600-46525200 Weak transcription NH-A brain
5 chr1:46498000-46528200 Weak transcription Osteobl bone
6 chr1:46498200-46528400 Weak transcription Colon Smooth Muscle Colon
7 chr1:46501000-46525200 Weak transcription Gastric stomach
8 chr1:46501400-46548200 Weak transcription Aorta Aorta
9 chr1:46501600-46523600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:46503400-46535600 Weak transcription Brain Anterior Caudate brain
11 chr1:46505000-46514200 Strong transcription Dnd41 blood
12 chr1:46505400-46531000 Weak transcription HUVEC blood vessel
13 chr1:46505600-46518600 Weak transcription K562 blood
14 chr1:46505600-46527800 Weak transcription Duodenum Mucosa Duodenum
15 chr1:46505600-46537600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:46506000-46549400 Weak transcription Muscle Satellite Cultured Cells --
17 chr1:46506200-46518800 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr1:46506200-46528200 Weak transcription Liver Liver
19 chr1:46507000-46523600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr1:46507000-46523800 Weak transcription Lung lung
21 chr1:46507400-46513400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr1:46508000-46526600 Weak transcription Stomach Smooth Muscle stomach
23 chr1:46508000-46528600 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr1:46508200-46519200 Weak transcription Right Ventricle heart
25 chr1:46508200-46526400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr1:46508400-46536200 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr1:46508400-46546600 Weak transcription HSMMtube muscle
28 chr1:46508800-46526600 Weak transcription Fetal Brain Male brain
29 chr1:46508800-46534200 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr1:46508800-46537400 Weak transcription HMEC breast
31 chr1:46509000-46514000 Weak transcription Fetal Heart heart
32 chr1:46509000-46524800 Weak transcription Primary T cells from cord blood blood
33 chr1:46509200-46523800 Weak transcription Thymus Thymus
34 chr1:46509400-46519000 Weak transcription Fetal Muscle Leg muscle
35 chr1:46509400-46521000 Weak transcription Brain Germinal Matrix brain
36 chr1:46509400-46523600 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr1:46509400-46524000 Weak transcription Fetal Thymus thymus
38 chr1:46509600-46513200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr1:46509600-46521200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:46509600-46522400 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr1:46509600-46524800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr1:46509600-46526600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr1:46509600-46526800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr1:46509600-46527000 Weak transcription Brain Angular Gyrus brain
45 chr1:46509600-46528400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr1:46509600-46529000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
47 chr1:46509600-46540200 Weak transcription Spleen Spleen
48 chr1:46509800-46515400 Weak transcription Brain Cingulate Gyrus brain
49 chr1:46509800-46523600 Weak transcription HUES48 Cell Line embryonic stem cell
50 chr1:46509800-46526000 Weak transcription iPS-18 Cell Line embryonic stem cell

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Last update: Aug 31, 2015