The 2.0 version of rSNPBase

Variant report

Variant rs12067716
Chromosome Location chr1:46434428-46434429
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46420000-46435000 Weak transcription Primary hematopoietic stem cells blood
2 chr1:46420200-46434800 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:46420200-46435000 Weak transcription Right Atrium heart
4 chr1:46420200-46436800 Weak transcription Lung lung
5 chr1:46420200-46437000 Weak transcription Esophagus oesophagus
6 chr1:46420200-46437000 Weak transcription Gastric stomach
7 chr1:46420200-46440200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr1:46420400-46434800 Weak transcription Colonic Mucosa Colon
9 chr1:46420400-46436800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:46420400-46437600 Weak transcription H1 Cell Line embryonic stem cell
11 chr1:46420400-46443000 Weak transcription Fetal Lung lung
12 chr1:46420600-46434800 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr1:46420600-46436600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr1:46420600-46443000 Weak transcription Adipose Nuclei Adipose
15 chr1:46420600-46455800 Weak transcription HUVEC blood vessel
16 chr1:46420800-46434800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr1:46420800-46437600 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr1:46420800-46437800 Weak transcription iPS-18 Cell Line embryonic stem cell
19 chr1:46420800-46439800 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr1:46420800-46439800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr1:46420800-46444600 Weak transcription Rectal Smooth Muscle rectum
22 chr1:46420800-46445200 Weak transcription Pancreas Pancrea
23 chr1:46421000-46437000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr1:46423000-46436800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr1:46423400-46435000 Weak transcription Brain Germinal Matrix brain
26 chr1:46423600-46437600 Weak transcription NHEK skin
27 chr1:46423600-46440400 Weak transcription HMEC breast
28 chr1:46423800-46439400 Weak transcription Thymus Thymus
29 chr1:46424800-46437800 Weak transcription Spleen Spleen
30 chr1:46425200-46444800 Weak transcription Fetal Kidney kidney
31 chr1:46425200-46444800 Weak transcription NH-A brain
32 chr1:46425200-46446400 Weak transcription GM12878-XiMat blood
33 chr1:46426600-46434600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr1:46426600-46434800 Weak transcription Fetal Intestine Small intestine
35 chr1:46426600-46436800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr1:46426600-46437600 Weak transcription Brain Inferior Temporal Lobe brain
37 chr1:46426800-46434800 Weak transcription Small Intestine intestine
38 chr1:46426800-46434800 Weak transcription HSMMtube muscle
39 chr1:46426800-46435000 Weak transcription Fetal Stomach stomach
40 chr1:46426800-46435400 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr1:46426800-46436800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr1:46426800-46436800 Weak transcription Ovary ovary
43 chr1:46426800-46437000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr1:46426800-46437600 Weak transcription Primary T cells from cord blood blood
45 chr1:46426800-46437600 Weak transcription Aorta Aorta
46 chr1:46426800-46441200 Weak transcription Primary B cells from cord blood blood
47 chr1:46426800-46460000 Weak transcription Psoas Muscle Psoas
48 chr1:46427000-46438000 Weak transcription Brain Angular Gyrus brain
49 chr1:46427000-46440600 Weak transcription Liver Liver
50 chr1:46427200-46435000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015