The 2.0 version of rSNPBase

Variant report

Variant rs34446427
Chromosome Location chr1:46417655-46417656
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46387600-46425000 Weak transcription Fetal Muscle Trunk muscle
2 chr1:46395200-46420600 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:46395400-46417800 Weak transcription HSMMtube muscle
4 chr1:46395400-46419000 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:46395800-46419200 Weak transcription Right Ventricle heart
6 chr1:46404800-46419800 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr1:46408400-46425200 Weak transcription Primary B cells from cord blood blood
8 chr1:46408800-46418800 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr1:46409000-46418800 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr1:46410800-46419200 Weak transcription Psoas Muscle Psoas
11 chr1:46411000-46419200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr1:46411000-46419800 Weak transcription Left Ventricle heart
13 chr1:46411600-46419800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:46411800-46419800 Weak transcription Aorta Aorta
15 chr1:46412000-46419000 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr1:46412200-46419200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr1:46412400-46419000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr1:46412800-46419000 Weak transcription Fetal Heart heart
19 chr1:46415000-46419000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:46415800-46418800 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr1:46415800-46426200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr1:46416000-46420000 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr1:46416000-46424800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr1:46416400-46417800 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr1:46417000-46417800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:46417000-46418200 Enhancers Breast Myoepithelial Primary Cells Breast
27 chr1:46417000-46418400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr1:46417000-46418400 Enhancers NHEK skin
29 chr1:46417400-46418200 Genic enhancers Skeletal Muscle Female skeletal muscle
30 chr1:46417400-46418400 Enhancers HMEC breast
31 chr1:46417400-46419600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr1:46417600-46418200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr1:46417600-46418400 Enhancers Osteobl bone
34 chr1:46417600-46419200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr1:46417600-46419200 Enhancers A549 lung
36 chr1:46417600-46419600 Enhancers Muscle Satellite Cultured Cells --
37 chr1:46417600-46419800 Enhancers HSMM muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015