The 2.0 version of rSNPBase

Variant report

Variant rs6674794
Chromosome Location chr1:46296067-46296068
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46270000-46299600 Weak transcription Spleen Spleen
2 chr1:46270200-46317000 Weak transcription Gastric stomach
3 chr1:46270400-46299400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr1:46270400-46300000 Weak transcription Aorta Aorta
5 chr1:46270400-46306600 Weak transcription Ovary ovary
6 chr1:46270400-46309600 Weak transcription Brain Inferior Temporal Lobe brain
7 chr1:46270400-46313400 Weak transcription Small Intestine intestine
8 chr1:46270600-46298800 Weak transcription Brain Anterior Caudate brain
9 chr1:46270600-46299200 Weak transcription Placenta Amnion Placenta Amnion
10 chr1:46270600-46305800 Weak transcription Colon Smooth Muscle Colon
11 chr1:46270600-46314000 Weak transcription H1 Cell Line embryonic stem cell
12 chr1:46270800-46306000 Weak transcription Rectal Smooth Muscle rectum
13 chr1:46270800-46307800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr1:46271000-46296800 Weak transcription Stomach Smooth Muscle stomach
15 chr1:46271200-46297800 Weak transcription Brain Hippocampus Middle brain
16 chr1:46271400-46309400 Weak transcription Fetal Kidney kidney
17 chr1:46272000-46306800 Weak transcription Fetal Brain Male brain
18 chr1:46274600-46309200 Weak transcription Hela-S3 cervix
19 chr1:46278800-46300400 Weak transcription Primary B cells from cord blood blood
20 chr1:46278800-46306400 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr1:46281600-46296800 Weak transcription NHEK skin
22 chr1:46281600-46302600 Weak transcription Psoas Muscle Psoas
23 chr1:46281800-46296200 Weak transcription HMEC breast
24 chr1:46281800-46299200 Weak transcription Muscle Satellite Cultured Cells --
25 chr1:46281800-46306400 Weak transcription NH-A brain
26 chr1:46281800-46309200 Weak transcription NHLF lung
27 chr1:46282000-46297800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr1:46282000-46298600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr1:46282200-46296800 Weak transcription HUVEC blood vessel
30 chr1:46282200-46306400 Weak transcription NHDF-Ad bronchial
31 chr1:46284200-46298400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr1:46285800-46306200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr1:46287000-46300600 Weak transcription Brain Substantia Nigra brain
34 chr1:46287000-46301800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr1:46287400-46298000 Weak transcription Fetal Brain Female brain
36 chr1:46287400-46315600 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr1:46288600-46296800 Weak transcription Primary T cells fromperipheralblood blood
38 chr1:46288600-46302400 Weak transcription Primary B cells from peripheral blood blood
39 chr1:46288800-46299800 Weak transcription Brain Cingulate Gyrus brain
40 chr1:46288800-46306400 Weak transcription ES-I3 Cell Line embryonic stem cell
41 chr1:46288800-46315600 Weak transcription Primary T cells from cord blood blood
42 chr1:46289000-46297200 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr1:46289000-46299000 Weak transcription Brain Germinal Matrix brain
44 chr1:46289800-46302800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr1:46290000-46297000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr1:46290000-46297200 Strong transcription K562 blood
47 chr1:46290200-46297800 Strong transcription iPS-20b Cell Line embryonic stem cell
48 chr1:46290200-46298000 Strong transcription Dnd41 blood
49 chr1:46290200-46298800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr1:46290200-46302200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015