Variant report

Variant rs11211222
Chromosome Location chr1:46367757-46367758
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:18 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46342200-46391200 Weak transcription Primary hematopoietic stem cells short term culture blood
2 chr1:46347400-46378400 Weak transcription Brain Germinal Matrix brain
3 chr1:46349600-46369000 Weak transcription Dnd41 blood
4 chr1:46350800-46378800 Weak transcription K562 blood
5 chr1:46357800-46376600 Weak transcription Psoas Muscle Psoas
6 chr1:46358000-46374400 Weak transcription Fetal Intestine Small intestine
7 chr1:46358400-46378200 Weak transcription Right Atrium heart
8 chr1:46358600-46374400 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr1:46358600-46377600 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr1:46358600-46377600 Weak transcription HSMM muscle
11 chr1:46359200-46378800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr1:46363000-46393800 Weak transcription A549 lung
13 chr1:46364600-46372600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr1:46366200-46369400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr1:46366600-46376200 Weak transcription Fetal Heart heart
16 chr1:46366800-46367800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr1:46367400-46367800 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
18 chr1:46367400-46379600 Weak transcription HepG2 liver

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