The 2.0 version of rSNPBase

Variant report

Variant rs946525
Chromosome Location chr1:46487277-46487278
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46461400-46488000 Weak transcription Muscle Satellite Cultured Cells --
2 chr1:46469400-46487600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr1:46469800-46488000 Weak transcription Esophagus oesophagus
4 chr1:46470600-46489800 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr1:46472000-46487800 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr1:46472200-46487600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:46473000-46500400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr1:46473600-46502600 Weak transcription Primary T cells fromperipheralblood blood
9 chr1:46474400-46487600 Weak transcription Gastric stomach
10 chr1:46474400-46502600 Weak transcription Primary B cells from peripheral blood blood
11 chr1:46474600-46488400 Weak transcription Primary T helper cells fromperipheralblood blood
12 chr1:46474600-46490400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr1:46474600-46496600 Weak transcription Fetal Thymus thymus
14 chr1:46474800-46487800 Weak transcription HMEC breast
15 chr1:46474800-46488200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr1:46475000-46488200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr1:46475400-46487400 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr1:46475600-46525000 Weak transcription Fetal Kidney kidney
19 chr1:46475800-46487400 Weak transcription Brain Substantia Nigra brain
20 chr1:46476200-46487600 Weak transcription Brain Hippocampus Middle brain
21 chr1:46476200-46488000 Weak transcription NHDF-Ad bronchial
22 chr1:46476200-46488200 Weak transcription Hela-S3 cervix
23 chr1:46476200-46502600 Weak transcription Stomach Mucosa stomach
24 chr1:46476400-46487400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr1:46476400-46488000 Weak transcription Pancreas Pancrea
26 chr1:46476400-46495200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr1:46476600-46515800 Weak transcription Primary T regulatory cells fromperipheralblood blood
28 chr1:46476800-46487600 Weak transcription H9 Cell Line embryonic stem cell
29 chr1:46477200-46487600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
30 chr1:46477200-46487600 Weak transcription NH-A brain
31 chr1:46477200-46487600 Weak transcription NHEK skin
32 chr1:46477200-46487800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr1:46477200-46487800 Weak transcription HSMMtube muscle
34 chr1:46477200-46488400 Weak transcription Fetal Brain Male brain
35 chr1:46477200-46488400 Weak transcription GM12878-XiMat blood
36 chr1:46477400-46487400 Weak transcription Primary B cells from cord blood blood
37 chr1:46477400-46487400 Weak transcription Osteobl bone
38 chr1:46477400-46487600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:46477400-46487600 Weak transcription Brain Anterior Caudate brain
40 chr1:46477400-46487600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr1:46477400-46487600 Weak transcription Colonic Mucosa Colon
42 chr1:46477400-46487600 Weak transcription Ovary ovary
43 chr1:46477400-46487600 Weak transcription NHLF lung
44 chr1:46477400-46487800 Weak transcription Thymus Thymus
45 chr1:46477400-46487800 Weak transcription HUVEC blood vessel
46 chr1:46477400-46488000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr1:46477400-46488000 Weak transcription Primary T cells from cord blood blood
48 chr1:46477400-46488200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr1:46477400-46489800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr1:46477400-46493800 Weak transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015