The 2.0 version of rSNPBase

Variant report

Variant rs1768815
Chromosome Location chr1:46528603-46528604
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46501400-46548200 Weak transcription Aorta Aorta
2 chr1:46503400-46535600 Weak transcription Brain Anterior Caudate brain
3 chr1:46505400-46531000 Weak transcription HUVEC blood vessel
4 chr1:46505600-46537600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr1:46506000-46549400 Weak transcription Muscle Satellite Cultured Cells --
6 chr1:46508400-46536200 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr1:46508400-46546600 Weak transcription HSMMtube muscle
8 chr1:46508800-46534200 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr1:46508800-46537400 Weak transcription HMEC breast
10 chr1:46509600-46529000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr1:46509600-46540200 Weak transcription Spleen Spleen
12 chr1:46510400-46531000 Weak transcription Primary B cells from cord blood blood
13 chr1:46510400-46548400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr1:46518200-46551600 Weak transcription Psoas Muscle Psoas
15 chr1:46518400-46528800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr1:46518600-46529600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr1:46519400-46529400 Weak transcription Right Ventricle heart
18 chr1:46520000-46531200 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr1:46522000-46532800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:46522200-46530600 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr1:46522600-46530600 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr1:46522600-46531000 Weak transcription ES-WA7 Cell Line embryonic stem cell
23 chr1:46524000-46538000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr1:46524800-46535400 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr1:46524800-46547000 Weak transcription Lung lung
26 chr1:46525200-46530400 Weak transcription Primary T cells from cord blood blood
27 chr1:46525200-46532800 Weak transcription H1 Cell Line embryonic stem cell
28 chr1:46525200-46543000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr1:46525400-46548800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr1:46525600-46532200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr1:46525600-46552600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr1:46526000-46528800 Strong transcription iPS-18 Cell Line embryonic stem cell
33 chr1:46526600-46531400 Strong transcription Left Ventricle heart
34 chr1:46526800-46528800 Strong transcription Fetal Muscle Trunk muscle
35 chr1:46527400-46529000 Weak transcription Brain Angular Gyrus brain
36 chr1:46527400-46531400 Weak transcription NH-A brain
37 chr1:46527400-46534800 Weak transcription Fetal Stomach stomach
38 chr1:46527600-46529000 Weak transcription Hela-S3 cervix
39 chr1:46527600-46530600 Weak transcription Fetal Brain Male brain
40 chr1:46527600-46531000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr1:46527600-46531000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr1:46527600-46531200 Weak transcription Primary hematopoietic stem cells blood
43 chr1:46527600-46533200 Weak transcription Fetal Kidney kidney
44 chr1:46527600-46534200 Weak transcription Fetal Lung lung
45 chr1:46527600-46534200 Weak transcription Fetal Muscle Leg muscle
46 chr1:46527600-46535200 Weak transcription HUES64 Cell Line embryonic stem cell
47 chr1:46527600-46536200 Weak transcription H9 Cell Line embryonic stem cell
48 chr1:46527600-46542400 Weak transcription Stomach Smooth Muscle stomach
49 chr1:46527600-46543400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr1:46527800-46528800 Enhancers Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015