Variant report

Variant rs1085240
Chromosome Location chr1:46523978-46523979
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46475600-46525000 Weak transcription Fetal Kidney kidney
2 chr1:46490200-46524600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:46490600-46525200 Weak transcription NH-A brain
4 chr1:46498000-46528200 Weak transcription Osteobl bone
5 chr1:46498200-46528400 Weak transcription Colon Smooth Muscle Colon
6 chr1:46501000-46525200 Weak transcription Gastric stomach
7 chr1:46501400-46548200 Weak transcription Aorta Aorta
8 chr1:46503400-46535600 Weak transcription Brain Anterior Caudate brain
9 chr1:46505400-46531000 Weak transcription HUVEC blood vessel
10 chr1:46505600-46527800 Weak transcription Duodenum Mucosa Duodenum
11 chr1:46505600-46537600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:46506000-46549400 Weak transcription Muscle Satellite Cultured Cells --
13 chr1:46506200-46528200 Weak transcription Liver Liver
14 chr1:46508000-46526600 Weak transcription Stomach Smooth Muscle stomach
15 chr1:46508000-46528600 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr1:46508200-46526400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr1:46508400-46536200 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr1:46508400-46546600 Weak transcription HSMMtube muscle
19 chr1:46508800-46526600 Weak transcription Fetal Brain Male brain
20 chr1:46508800-46534200 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr1:46508800-46537400 Weak transcription HMEC breast
22 chr1:46509000-46524800 Weak transcription Primary T cells from cord blood blood
23 chr1:46509400-46524000 Weak transcription Fetal Thymus thymus
24 chr1:46509600-46524800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr1:46509600-46526600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr1:46509600-46526800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr1:46509600-46527000 Weak transcription Brain Angular Gyrus brain
28 chr1:46509600-46528400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr1:46509600-46529000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr1:46509600-46540200 Weak transcription Spleen Spleen
31 chr1:46509800-46526000 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr1:46509800-46528000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
33 chr1:46510000-46527000 Weak transcription Brain Inferior Temporal Lobe brain
34 chr1:46510400-46531000 Weak transcription Primary B cells from cord blood blood
35 chr1:46510400-46548400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr1:46510800-46526400 Weak transcription Adipose Nuclei Adipose
37 chr1:46511200-46526400 Weak transcription HSMM muscle
38 chr1:46515200-46524600 Weak transcription HUES64 Cell Line embryonic stem cell
39 chr1:46515200-46526400 Weak transcription Fetal Heart heart
40 chr1:46518200-46551600 Weak transcription Psoas Muscle Psoas
41 chr1:46518400-46528800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr1:46518600-46525800 Strong transcription Left Ventricle heart
43 chr1:46518600-46529600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr1:46519000-46527600 Strong transcription Fetal Muscle Leg muscle
45 chr1:46519400-46529400 Weak transcription Right Ventricle heart
46 chr1:46519600-46528200 Weak transcription Ovary ovary
47 chr1:46519800-46526600 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr1:46520000-46526800 Weak transcription K562 blood
49 chr1:46520000-46531200 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr1:46520200-46528200 Weak transcription Pancreatic Islets Pancreatic Islet

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