Variant report

Variant rs4074225
Chromosome Location chr1:46392364-46392365
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46363000-46393800 Weak transcription A549 lung
2 chr1:46373000-46395000 Weak transcription Gastric stomach
3 chr1:46379600-46394600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:46379800-46394600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr1:46379800-46395000 Weak transcription Brain Cingulate Gyrus brain
6 chr1:46379800-46395200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:46380400-46394800 Weak transcription NHDF-Ad bronchial
8 chr1:46380400-46395000 Weak transcription NHLF lung
9 chr1:46380600-46394800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr1:46380800-46394200 Weak transcription Muscle Satellite Cultured Cells --
11 chr1:46380800-46394400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr1:46380800-46395000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr1:46380800-46404600 Weak transcription Rectal Smooth Muscle rectum
14 chr1:46383200-46393600 Weak transcription Dnd41 blood
15 chr1:46383600-46394200 Weak transcription HepG2 liver
16 chr1:46387600-46425000 Weak transcription Fetal Muscle Trunk muscle
17 chr1:46388000-46395800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr1:46388200-46395000 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr1:46388200-46396400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr1:46388400-46395000 Weak transcription Stomach Smooth Muscle stomach
21 chr1:46388400-46408200 Weak transcription Brain Germinal Matrix brain
22 chr1:46388600-46392600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr1:46388800-46392400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr1:46388800-46394800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr1:46388800-46395000 Weak transcription Right Ventricle heart
26 chr1:46389000-46394400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:46389000-46394800 Weak transcription Fetal Intestine Small intestine
28 chr1:46389000-46394800 Weak transcription Left Ventricle heart
29 chr1:46389000-46395000 Weak transcription Fetal Stomach stomach
30 chr1:46389000-46410400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr1:46389400-46392400 Enhancers Skeletal Muscle Female skeletal muscle
32 chr1:46389800-46396400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr1:46390200-46392600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
34 chr1:46390400-46392600 Enhancers H9 Cell Line embryonic stem cell
35 chr1:46390600-46392400 Enhancers Duodenum Mucosa Duodenum
36 chr1:46390600-46392400 Enhancers Small Intestine intestine
37 chr1:46390600-46392600 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
38 chr1:46390800-46392600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr1:46390800-46393400 Enhancers Skeletal Muscle Male skeletal muscle
40 chr1:46390800-46397600 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr1:46391000-46392600 Enhancers Fetal Thymus thymus
42 chr1:46391200-46392400 Enhancers Primary B cells from peripheral blood blood
43 chr1:46391200-46392600 Enhancers Primary hematopoietic stem cells short term culture blood
44 chr1:46391200-46392600 Enhancers Thymus Thymus
45 chr1:46391200-46392800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
46 chr1:46391200-46393200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr1:46391200-46394400 Weak transcription Osteobl bone
48 chr1:46391200-46395000 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr1:46391400-46392400 Enhancers Primary hematopoietic stem cells blood
50 chr1:46391400-46392600 Enhancers ES-WA7 Cell Line embryonic stem cell

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