The 2.0 version of rSNPBase

Variant report

Variant rs6676982
Chromosome Location chr1:46275401-46275402
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46270000-46299600 Weak transcription Spleen Spleen
2 chr1:46270200-46277800 Weak transcription Placenta Placenta
3 chr1:46270200-46280800 Weak transcription Left Ventricle heart
4 chr1:46270200-46286600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:46270200-46290800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:46270200-46317000 Weak transcription Gastric stomach
7 chr1:46270400-46278200 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr1:46270400-46281200 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr1:46270400-46286800 Weak transcription Brain Substantia Nigra brain
10 chr1:46270400-46299400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:46270400-46300000 Weak transcription Aorta Aorta
12 chr1:46270400-46306600 Weak transcription Ovary ovary
13 chr1:46270400-46309600 Weak transcription Brain Inferior Temporal Lobe brain
14 chr1:46270400-46313400 Weak transcription Small Intestine intestine
15 chr1:46270600-46276600 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr1:46270600-46277800 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr1:46270600-46278400 Weak transcription Primary B cells from cord blood blood
18 chr1:46270600-46281400 Weak transcription Muscle Satellite Cultured Cells --
19 chr1:46270600-46281400 Weak transcription HMEC breast
20 chr1:46270600-46281400 Weak transcription NH-A brain
21 chr1:46270600-46281600 Weak transcription H9 Cell Line embryonic stem cell
22 chr1:46270600-46281800 Weak transcription Brain Cingulate Gyrus brain
23 chr1:46270600-46284800 Weak transcription Primary B cells from peripheral blood blood
24 chr1:46270600-46286800 Weak transcription Adipose Nuclei Adipose
25 chr1:46270600-46288400 Weak transcription Primary T cells from cord blood blood
26 chr1:46270600-46290000 Weak transcription Fetal Lung lung
27 chr1:46270600-46291600 Weak transcription HSMMtube muscle
28 chr1:46270600-46294600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr1:46270600-46298800 Weak transcription Brain Anterior Caudate brain
30 chr1:46270600-46299200 Weak transcription Placenta Amnion Placenta Amnion
31 chr1:46270600-46305800 Weak transcription Colon Smooth Muscle Colon
32 chr1:46270600-46314000 Weak transcription H1 Cell Line embryonic stem cell
33 chr1:46270800-46281400 Weak transcription Osteobl bone
34 chr1:46270800-46285000 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr1:46270800-46286000 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr1:46270800-46291800 Weak transcription HUES48 Cell Line embryonic stem cell
37 chr1:46270800-46306000 Weak transcription Rectal Smooth Muscle rectum
38 chr1:46270800-46307800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr1:46271000-46285600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr1:46271000-46287600 Weak transcription Colonic Mucosa Colon
41 chr1:46271000-46296800 Weak transcription Stomach Smooth Muscle stomach
42 chr1:46271200-46277000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr1:46271200-46277800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr1:46271200-46278200 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr1:46271200-46278400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr1:46271200-46281200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr1:46271200-46281200 Weak transcription NHDF-Ad bronchial
48 chr1:46271200-46281200 Weak transcription NHEK skin
49 chr1:46271200-46281400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr1:46271200-46286600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015