Variant report

Variant rs11211217
Chromosome Location chr1:46348229-46348230
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46330200-46353200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:46330200-46357600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr1:46332200-46357400 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr1:46333800-46357400 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr1:46336600-46356800 Weak transcription Small Intestine intestine
6 chr1:46336600-46357600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:46337600-46350400 Weak transcription Fetal Lung lung
8 chr1:46337800-46356000 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr1:46338000-46350400 Weak transcription HSMM muscle
10 chr1:46338000-46357400 Weak transcription Hela-S3 cervix
11 chr1:46338400-46350000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr1:46338400-46353000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr1:46338400-46357600 Weak transcription Fetal Intestine Large intestine
14 chr1:46339200-46355000 Weak transcription Fetal Intestine Small intestine
15 chr1:46342000-46350400 Weak transcription K562 blood
16 chr1:46342200-46357000 Weak transcription HUVEC blood vessel
17 chr1:46342200-46391200 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr1:46342600-46350400 Weak transcription Aorta Aorta
19 chr1:46343200-46352400 Weak transcription Psoas Muscle Psoas
20 chr1:46346200-46348600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr1:46346200-46349400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr1:46346200-46349800 Weak transcription A549 lung
23 chr1:46346400-46357000 Weak transcription Left Ventricle heart
24 chr1:46347200-46357400 Weak transcription Muscle Satellite Cultured Cells --
25 chr1:46347400-46349000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr1:46347400-46349600 Weak transcription Primary neutrophils fromperipheralblood blood
27 chr1:46347400-46353000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr1:46347400-46357200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:46347400-46357400 Weak transcription NH-A brain
30 chr1:46347400-46357400 Weak transcription NHDF-Ad bronchial
31 chr1:46347400-46378400 Weak transcription Brain Germinal Matrix brain
32 chr1:46347600-46349000 Weak transcription Osteobl bone
33 chr1:46348000-46348600 Strong transcription HepG2 liver
34 chr1:46348200-46348400 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr1:46348200-46348400 Enhancers Fetal Muscle Leg muscle
36 chr1:46348200-46348600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr1:46348200-46348600 Strong transcription HSMMtube muscle

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