The 2.0 version of rSNPBase

Variant report

Variant rs6666763
Chromosome Location chr1:46436451-46436452
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46420200-46436800 Weak transcription Lung lung
2 chr1:46420200-46437000 Weak transcription Esophagus oesophagus
3 chr1:46420200-46437000 Weak transcription Gastric stomach
4 chr1:46420200-46440200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr1:46420400-46436800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:46420400-46437600 Weak transcription H1 Cell Line embryonic stem cell
7 chr1:46420400-46443000 Weak transcription Fetal Lung lung
8 chr1:46420600-46436600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr1:46420600-46443000 Weak transcription Adipose Nuclei Adipose
10 chr1:46420600-46455800 Weak transcription HUVEC blood vessel
11 chr1:46420800-46437600 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr1:46420800-46437800 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr1:46420800-46439800 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr1:46420800-46439800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr1:46420800-46444600 Weak transcription Rectal Smooth Muscle rectum
16 chr1:46420800-46445200 Weak transcription Pancreas Pancrea
17 chr1:46421000-46437000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr1:46423000-46436800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr1:46423600-46437600 Weak transcription NHEK skin
20 chr1:46423600-46440400 Weak transcription HMEC breast
21 chr1:46423800-46439400 Weak transcription Thymus Thymus
22 chr1:46424800-46437800 Weak transcription Spleen Spleen
23 chr1:46425200-46444800 Weak transcription Fetal Kidney kidney
24 chr1:46425200-46444800 Weak transcription NH-A brain
25 chr1:46425200-46446400 Weak transcription GM12878-XiMat blood
26 chr1:46426600-46436800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr1:46426600-46437600 Weak transcription Brain Inferior Temporal Lobe brain
28 chr1:46426800-46436800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr1:46426800-46436800 Weak transcription Ovary ovary
30 chr1:46426800-46437000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr1:46426800-46437600 Weak transcription Primary T cells from cord blood blood
32 chr1:46426800-46437600 Weak transcription Aorta Aorta
33 chr1:46426800-46441200 Weak transcription Primary B cells from cord blood blood
34 chr1:46426800-46460000 Weak transcription Psoas Muscle Psoas
35 chr1:46427000-46438000 Weak transcription Brain Angular Gyrus brain
36 chr1:46427000-46440600 Weak transcription Liver Liver
37 chr1:46427200-46436800 Weak transcription A549 lung
38 chr1:46427200-46437400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr1:46427200-46437800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr1:46427200-46437800 Weak transcription Primary neutrophils fromperipheralblood blood
41 chr1:46427400-46436600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr1:46427400-46436800 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr1:46427400-46436800 Weak transcription Right Ventricle heart
44 chr1:46427400-46437000 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr1:46427400-46437000 Weak transcription HSMM muscle
46 chr1:46427400-46437400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr1:46427400-46437600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr1:46427400-46437600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr1:46431800-46436800 Weak transcription Fetal Heart heart
50 chr1:46431800-46437600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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Last update: Aug 31, 2015