Variant report

Variant rs809774
Chromosome Location chr1:46560244-46560245
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:16 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46532400-46575200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:46540400-46595200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:46541200-46595800 Weak transcription Fetal Intestine Small intestine
4 chr1:46543000-46564400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr1:46549800-46562600 Weak transcription Dnd41 blood
6 chr1:46551200-46560400 Weak transcription GM12878-XiMat blood
7 chr1:46551200-46562000 Weak transcription HSMM muscle
8 chr1:46552600-46560400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr1:46553600-46577000 Weak transcription Left Ventricle heart
10 chr1:46558600-46560800 Enhancers Cortex derived primary cultured neurospheres brain
11 chr1:46559400-46560600 Enhancers Psoas Muscle Psoas
12 chr1:46560000-46560400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr1:46560200-46560400 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
14 chr1:46560200-46560600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr1:46560200-46560600 Enhancers Adipose Nuclei Adipose
16 chr1:46560200-46561800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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