The 2.0 version of rSNPBase

Variant report

Variant rs785507
Chromosome Location chr1:46541558-46541559
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46501400-46548200 Weak transcription Aorta Aorta
2 chr1:46506000-46549400 Weak transcription Muscle Satellite Cultured Cells --
3 chr1:46508400-46546600 Weak transcription HSMMtube muscle
4 chr1:46510400-46548400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr1:46518200-46551600 Weak transcription Psoas Muscle Psoas
6 chr1:46524800-46547000 Weak transcription Lung lung
7 chr1:46525200-46543000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr1:46525400-46548800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:46525600-46552600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:46527600-46542400 Weak transcription Stomach Smooth Muscle stomach
11 chr1:46527600-46543400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr1:46527800-46543000 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr1:46527800-46546400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr1:46527800-46550400 Weak transcription Fetal Heart heart
15 chr1:46528600-46552200 Weak transcription Thymus Thymus
16 chr1:46528800-46550400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr1:46529000-46543200 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr1:46529000-46549800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr1:46529400-46545200 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr1:46529400-46545400 Weak transcription Small Intestine intestine
21 chr1:46531200-46543800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr1:46531400-46543600 Weak transcription Fetal Brain Male brain
23 chr1:46531400-46543600 Weak transcription HSMM muscle
24 chr1:46531400-46543800 Weak transcription Primary T cells from cord blood blood
25 chr1:46531400-46546600 Weak transcription HUVEC blood vessel
26 chr1:46531600-46543000 Weak transcription Fetal Intestine Large intestine
27 chr1:46531800-46547200 Weak transcription Adipose Nuclei Adipose
28 chr1:46532400-46575200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr1:46532600-46543800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr1:46532800-46543200 Weak transcription ES-I3 Cell Line embryonic stem cell
31 chr1:46532800-46547200 Weak transcription Right Ventricle heart
32 chr1:46533400-46550200 Weak transcription NH-A brain
33 chr1:46533800-46542000 Weak transcription Fetal Kidney kidney
34 chr1:46534400-46543600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr1:46535000-46542200 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr1:46535200-46547000 Weak transcription Placenta Placenta
37 chr1:46535200-46547000 Weak transcription Fetal Stomach stomach
38 chr1:46536400-46547400 Weak transcription Fetal Lung lung
39 chr1:46536600-46543000 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr1:46536600-46543400 Weak transcription Fetal Thymus thymus
41 chr1:46536600-46547000 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr1:46536600-46547200 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr1:46537000-46542800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr1:46537600-46541800 Strong transcription Brain Germinal Matrix brain
45 chr1:46537600-46547000 Weak transcription Right Atrium heart
46 chr1:46537800-46542000 Strong transcription Hela-S3 cervix
47 chr1:46538400-46543200 Weak transcription NHEK skin
48 chr1:46538600-46543200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr1:46538800-46543400 Strong transcription Dnd41 blood
50 chr1:46538800-46543600 Strong transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015