Variant report

Variant rs4134387
Chromosome Location chr1:46395158-46395159
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46379800-46395200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:46380800-46404600 Weak transcription Rectal Smooth Muscle rectum
3 chr1:46387600-46425000 Weak transcription Fetal Muscle Trunk muscle
4 chr1:46388000-46395800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr1:46388200-46396400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr1:46388400-46408200 Weak transcription Brain Germinal Matrix brain
7 chr1:46389000-46410400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr1:46389800-46396400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr1:46390800-46397600 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr1:46391800-46408000 Weak transcription Primary B cells from cord blood blood
11 chr1:46392600-46395600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr1:46392600-46410400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr1:46392600-46411200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr1:46393400-46396200 Enhancers ES-I3 Cell Line embryonic stem cell
15 chr1:46393400-46396600 Enhancers iPS-18 Cell Line embryonic stem cell
16 chr1:46393400-46410600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr1:46393600-46395400 Enhancers Dnd41 blood
18 chr1:46393600-46396600 Enhancers iPS-15b Cell Line embryonic stem cell
19 chr1:46393800-46395600 Enhancers Fetal Heart heart
20 chr1:46394000-46395400 Enhancers Primary T helper 17 cells PMA-I stimulated --
21 chr1:46394200-46395400 Enhancers Primary Natural Killer cells fromperipheralblood blood
22 chr1:46394200-46395400 Enhancers Fetal Thymus thymus
23 chr1:46394200-46395400 Enhancers Thymus Thymus
24 chr1:46394200-46395600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr1:46394200-46395600 Enhancers HepG2 liver
26 chr1:46394200-46396800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
27 chr1:46394400-46395400 Enhancers Primary hematopoietic stem cells blood
28 chr1:46394400-46395400 Enhancers Small Intestine intestine
29 chr1:46394400-46395400 Enhancers HUVEC blood vessel
30 chr1:46394400-46395600 Enhancers Primary hematopoietic stem cells short term culture blood
31 chr1:46394400-46395600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
32 chr1:46394400-46395800 Enhancers NH-A brain
33 chr1:46394400-46396800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr1:46394600-46395200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr1:46394600-46395200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
36 chr1:46394600-46395400 Enhancers Cortex derived primary cultured neurospheres brain
37 chr1:46394600-46395400 Enhancers Skeletal Muscle Female skeletal muscle
38 chr1:46394600-46395600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
39 chr1:46394600-46395600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr1:46394600-46396600 Enhancers H1 Cell Line embryonic stem cell
41 chr1:46394800-46395200 Enhancers Primary T killer naive cells fromperipheralblood blood
42 chr1:46394800-46395200 Enhancers Placenta Amnion Placenta Amnion
43 chr1:46394800-46395200 Flanking Active TSS K562 blood
44 chr1:46394800-46395200 Flanking Active TSS Osteobl bone
45 chr1:46394800-46395400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr1:46394800-46395400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
47 chr1:46394800-46395400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr1:46394800-46395400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
49 chr1:46394800-46395400 Enhancers Fetal Intestine Small intestine
50 chr1:46394800-46395400 Enhancers Left Ventricle heart

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