The 2.0 version of rSNPBase

Variant report

Variant rs6703355
Chromosome Location chr1:173431193-173431194
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173419000-173432000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:173419000-173439000 Weak transcription iPS-18 Cell Line embryonic stem cell
3 chr1:173421000-173432200 Weak transcription Fetal Brain Male brain
4 chr1:173421400-173434000 Weak transcription Psoas Muscle Psoas
5 chr1:173423200-173432000 Weak transcription A549 lung
6 chr1:173423400-173432600 Weak transcription HUES64 Cell Line embryonic stem cell
7 chr1:173423600-173432600 Weak transcription Placenta Amnion Placenta Amnion
8 chr1:173423800-173433400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:173423800-173436600 Weak transcription NHDF-Ad bronchial
10 chr1:173423800-173442400 Weak transcription NH-A brain
11 chr1:173425200-173442400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr1:173425400-173432200 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr1:173426000-173431400 Weak transcription Fetal Kidney kidney
14 chr1:173427600-173431200 Strong transcription Primary B cells from peripheral blood blood
15 chr1:173428600-173431600 Strong transcription Liver Liver
16 chr1:173428800-173431200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr1:173428800-173431200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
18 chr1:173428800-173431400 Strong transcription Primary monocytes fromperipheralblood blood
19 chr1:173428800-173431400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr1:173428800-173431400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr1:173428800-173431400 Strong transcription Brain Anterior Caudate brain
22 chr1:173428800-173432000 Strong transcription Primary T cells from cord blood blood
23 chr1:173429000-173431200 Strong transcription Primary B cells from cord blood blood
24 chr1:173429000-173431200 Strong transcription Muscle Satellite Cultured Cells --
25 chr1:173429000-173431200 Strong transcription Brain Substantia Nigra brain
26 chr1:173429000-173431200 Strong transcription Stomach Smooth Muscle stomach
27 chr1:173429000-173431200 Strong transcription HepG2 liver
28 chr1:173429000-173431200 Strong transcription Monocytes-CD14+_RO01746 blood
29 chr1:173429000-173431400 Strong transcription Duodenum Smooth Muscle Duodenum
30 chr1:173429000-173431400 Strong transcription Spleen Spleen
31 chr1:173429000-173431400 Strong transcription HSMM muscle
32 chr1:173429000-173431800 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr1:173429000-173432600 Strong transcription Sigmoid Colon Sigmoid Colon
34 chr1:173429200-173431400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr1:173429400-173431200 Strong transcription HUES48 Cell Line embryonic stem cell
36 chr1:173429400-173431400 Strong transcription Dnd41 blood
37 chr1:173429400-173431800 Strong transcription Primary neutrophils fromperipheralblood blood
38 chr1:173429400-173433600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr1:173429400-173439800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr1:173429600-173431200 Strong transcription Primary T helper naive cells fromperipheralblood blood
41 chr1:173429600-173431400 Strong transcription HUES6 Cell Line embryonic stem cell
42 chr1:173429600-173431400 Strong transcription Fetal Muscle Leg muscle
43 chr1:173429600-173433400 Weak transcription HMEC breast
44 chr1:173429800-173431200 Strong transcription Primary T helper cells fromperipheralblood blood
45 chr1:173429800-173431400 Strong transcription Primary T cells fromperipheralblood blood
46 chr1:173430000-173431200 Strong transcription Primary hematopoietic stem cells blood
47 chr1:173430000-173431200 Strong transcription Skeletal Muscle Female skeletal muscle
48 chr1:173430200-173431200 Strong transcription Duodenum Mucosa Duodenum
49 chr1:173430200-173431400 Strong transcription K562 blood
50 chr1:173430400-173435000 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015