The 2.0 version of rSNPBase

Variant report

Variant rs6727669
Chromosome Location chr2:191375478-191375479
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191334800-191394800 Weak transcription HSMMtube muscle
2 chr2:191349600-191394600 Weak transcription NHLF lung
3 chr2:191351400-191385400 Weak transcription NHEK skin
4 chr2:191352200-191380600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr2:191352400-191381600 Weak transcription Osteobl bone
6 chr2:191354600-191394600 Weak transcription HSMM muscle
7 chr2:191357200-191398200 Weak transcription Fetal Kidney kidney
8 chr2:191358400-191379200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr2:191361000-191376000 Strong transcription Primary T cells fromperipheralblood blood
10 chr2:191361600-191379800 Strong transcription Fetal Thymus thymus
11 chr2:191361800-191375800 Strong transcription Primary T regulatory cells fromperipheralblood blood
12 chr2:191361800-191376000 Strong transcription Primary T helper cells fromperipheralblood blood
13 chr2:191362200-191379200 Strong transcription Dnd41 blood
14 chr2:191362800-191398200 Weak transcription Fetal Brain Male brain
15 chr2:191364200-191376200 Strong transcription Primary T cells from cord blood blood
16 chr2:191365000-191383200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr2:191365200-191377400 Weak transcription Pancreas Pancrea
18 chr2:191365200-191380000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr2:191365200-191398000 Weak transcription Rectal Smooth Muscle rectum
20 chr2:191365400-191392400 Weak transcription HepG2 liver
21 chr2:191365800-191397400 Weak transcription Liver Liver
22 chr2:191366400-191386400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr2:191366600-191381000 Weak transcription Placenta Amnion Placenta Amnion
24 chr2:191367200-191393000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr2:191367400-191382400 Weak transcription NHDF-Ad bronchial
26 chr2:191367600-191377200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr2:191368400-191376800 Weak transcription Hela-S3 cervix
28 chr2:191368400-191379800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr2:191368600-191380000 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr2:191368800-191377400 Weak transcription Esophagus oesophagus
31 chr2:191369000-191375600 Weak transcription Right Ventricle heart
32 chr2:191369000-191377400 Weak transcription Gastric stomach
33 chr2:191369000-191377400 Weak transcription Lung lung
34 chr2:191369000-191377600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr2:191369000-191377600 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr2:191369000-191379600 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr2:191369000-191379800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr2:191369000-191394400 Weak transcription Aorta Aorta
39 chr2:191369200-191377400 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr2:191369200-191380000 Weak transcription Primary T killer naive cells fromperipheralblood blood
41 chr2:191370000-191380000 Weak transcription Fetal Brain Female brain
42 chr2:191370200-191377400 Weak transcription Left Ventricle heart
43 chr2:191370400-191376000 Enhancers Rectal Mucosa Donor 31 rectum
44 chr2:191370800-191382800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr2:191370800-191394400 Weak transcription A549 lung
46 chr2:191371000-191377600 Weak transcription Brain Angular Gyrus brain
47 chr2:191371000-191379800 Weak transcription Brain Germinal Matrix brain
48 chr2:191371000-191393000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr2:191371600-191377200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr2:191371800-191377800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015