Variant report

Variant	rs67339128
Chromosome Location	chr11:45108906-45108907
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:45105429..45108099-chr11:45108828..45110470,2	K562	blood:

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs12291824	0.83[AFR][1000 genomes]
rs12789848	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1872887	0.83[EUR][1000 genomes]
rs34292643	0.91[EUR][1000 genomes]
rs34828361	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs35163470	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs35605527	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs55797423	0.88[EUR][1000 genomes]
rs56196945	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs72907014	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7935697	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7936926	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7952442	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7952646	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]

No data

Chromatin state (count:79 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:45099800-45109000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
2	chr11:45100400-45113400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr11:45101600-45109600	Weak transcription	Right Atrium	heart
4	chr11:45102000-45109000	Weak transcription	Fetal Brain Female	brain
5	chr11:45102600-45109000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr11:45102600-45109200	Weak transcription	NHEK	skin
7	chr11:45102600-45109800	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr11:45103600-45110400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
9	chr11:45105200-45109200	Weak transcription	Fetal Intestine Large	intestine
10	chr11:45105200-45110600	Weak transcription	Fetal Intestine Small	intestine
11	chr11:45105400-45109000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr11:45105400-45109800	Weak transcription	Lung	lung
13	chr11:45105600-45112400	Weak transcription	Primary hematopoietic stem cells	blood
14	chr11:45105600-45113400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
15	chr11:45105600-45113400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
16	chr11:45106000-45113200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
17	chr11:45106600-45110200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
18	chr11:45106600-45111600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
19	chr11:45106800-45110400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr11:45107000-45109400	Enhancers	iPS-15b Cell Line	embryonic stem cell
21	chr11:45107000-45109400	Enhancers	iPS-20b Cell Line	embryonic stem cell
22	chr11:45107000-45109800	Enhancers	HUES48 Cell Line	embryonic stem cell
23	chr11:45107000-45109800	Enhancers	Primary hematopoietic stem cells short term culture	blood
24	chr11:45107000-45110000	Enhancers	H1 Cell Line	embryonic stem cell
25	chr11:45107000-45110200	Enhancers	HUES6 Cell Line	embryonic stem cell
26	chr11:45107000-45110200	Enhancers	Brain Germinal Matrix	brain
27	chr11:45107000-45116600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr11:45107200-45109800	Enhancers	ES-I3 Cell Line	embryonic stem cell
29	chr11:45107400-45109600	Enhancers	Placenta	Placenta
30	chr11:45107400-45110400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
31	chr11:45107400-45111400	Enhancers	Fetal Stomach	stomach
32	chr11:45107400-45111800	Enhancers	Right Ventricle	heart
33	chr11:45107400-45112400	Enhancers	Fetal Muscle Leg	muscle
34	chr11:45107400-45117400	Enhancers	Breast Myoepithelial Primary Cells	Breast
35	chr11:45107600-45109200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr11:45107600-45109400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
37	chr11:45107600-45109600	Enhancers	Primary B cells from peripheral blood	blood
38	chr11:45107600-45111400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
39	chr11:45107600-45111800	Enhancers	Esophagus	oesophagus
40	chr11:45107600-45112800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
41	chr11:45107600-45115600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr11:45107600-45117200	Enhancers	Spleen	Spleen
43	chr11:45107800-45109200	Weak transcription	HMEC	breast
44	chr11:45107800-45111400	Enhancers	Brain Hippocampus Middle	brain
45	chr11:45107800-45115600	Enhancers	NHLF	lung
46	chr11:45108000-45109000	Enhancers	iPS-18 Cell Line	embryonic stem cell
47	chr11:45108000-45109800	Enhancers	Primary B cells from cord blood	blood
48	chr11:45108000-45111400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
49	chr11:45108000-45112400	Weak transcription	HUES64 Cell Line	embryonic stem cell
50	chr11:45108000-45112800	Enhancers	Skeletal Muscle Male	skeletal muscle

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