Variant report

Variant	rs7936926
Chromosome Location	chr11:45116064-45116065
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs12789848	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1872887	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs34292643	0.80[EUR][1000 genomes]
rs34828361	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35163470	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs35605527	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs55797423	1.00[EUR][1000 genomes]
rs56196945	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs67339128	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs67712140	0.82[EUR][1000 genomes]
rs72907014	0.83[AFR][1000 genomes];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7935697	1.00[CEU][hapmap];0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7952442	1.00[CEU][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7952646	1.00[CEU][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:45 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:45107000-45116600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr11:45107400-45117400	Enhancers	Breast Myoepithelial Primary Cells	Breast
3	chr11:45107600-45117200	Enhancers	Spleen	Spleen
4	chr11:45108200-45116200	Enhancers	NHDF-Ad	bronchial
5	chr11:45110000-45116200	Weak transcription	Fetal Brain Male	brain
6	chr11:45110000-45116400	Weak transcription	Brain Substantia Nigra	brain
7	chr11:45111800-45119200	Weak transcription	Aorta	Aorta
8	chr11:45112400-45117600	Enhancers	Primary hematopoietic stem cells	blood
9	chr11:45113200-45116200	Enhancers	Primary B cells from cord blood	blood
10	chr11:45113200-45116800	Enhancers	Primary B cells from peripheral blood	blood
11	chr11:45113200-45117000	Enhancers	Thymus	Thymus
12	chr11:45113200-45117000	Enhancers	NHEK	skin
13	chr11:45113200-45117200	Enhancers	Primary T cells fromperipheralblood	blood
14	chr11:45113200-45117200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
15	chr11:45113200-45117600	Enhancers	Fetal Thymus	thymus
16	chr11:45113400-45116600	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr11:45113400-45116600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
18	chr11:45113800-45123800	Weak transcription	Primary T helper cells fromperipheralblood	blood
19	chr11:45114000-45118000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
20	chr11:45114000-45119200	Weak transcription	Left Ventricle	heart
21	chr11:45114000-45119200	Weak transcription	Pancreas	Pancrea
22	chr11:45114400-45117200	Enhancers	Dnd41	blood
23	chr11:45114400-45119200	Weak transcription	Right Atrium	heart
24	chr11:45114600-45119400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
25	chr11:45114800-45119200	Weak transcription	Brain Hippocampus Middle	brain
26	chr11:45114800-45121800	Weak transcription	H9 Cell Line	embryonic stem cell
27	chr11:45114800-45124200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
28	chr11:45115000-45116400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
29	chr11:45115000-45116600	Weak transcription	H1 Cell Line	embryonic stem cell
30	chr11:45115200-45116400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
31	chr11:45115200-45117200	Enhancers	Brain Anterior Caudate	brain
32	chr11:45115200-45119200	Weak transcription	Lung	lung
33	chr11:45115200-45119600	Weak transcription	Right Ventricle	heart
34	chr11:45115400-45116400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
35	chr11:45115400-45119000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
36	chr11:45115400-45119200	Weak transcription	Esophagus	oesophagus
37	chr11:45115600-45116200	Weak transcription	Fetal Brain Female	brain
38	chr11:45115600-45116600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
39	chr11:45115600-45117400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
40	chr11:45115600-45118600	Weak transcription	HMEC	breast
41	chr11:45115600-45122000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
42	chr11:45115800-45117400	Enhancers	Primary hematopoietic stem cells short term culture	blood
43	chr11:45115800-45117800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr11:45116000-45116400	Weak transcription	Skeletal Muscle Female	skeletal muscle
45	chr11:45116000-45121800	Weak transcription	Primary T killer memory cells from peripheral blood	blood

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