Variant report
Variant | rs680675 |
---|---|
Chromosome Location | chr11:84883931-84883932 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11234316 | 0.91[ASN][1000 genomes] |
rs12419394 | 0.81[ASN][1000 genomes] |
rs1682383 | 0.81[ASN][1000 genomes] |
rs17810088 | 0.87[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs1826612 | 0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[ASN][1000 genomes] |
rs1914376 | 0.84[ASN][1000 genomes] |
rs473968 | 0.81[ASN][1000 genomes] |
rs475164 | 0.81[ASN][1000 genomes] |
rs476781 | 0.83[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs4944513 | 0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs495905 | 0.81[ASN][1000 genomes] |
rs496814 | 0.84[ASN][1000 genomes] |
rs512775 | 0.81[ASN][1000 genomes] |
rs512910 | 0.81[ASN][1000 genomes] |
rs516620 | 0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs519429 | 0.81[ASN][1000 genomes] |
rs530293 | 0.83[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs531331 | 0.85[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs534604 | 0.81[ASN][1000 genomes] |
rs539551 | 0.83[ASN][1000 genomes] |
rs550981 | 0.83[ASN][1000 genomes] |
rs73525446 | 0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs789599 | 0.85[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs938728 | 0.81[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs951729 | 0.81[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv527535 | chr11:84724795-84895033 | Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
2 | nsv528491 | chr11:84724795-84895033 | Weak transcription Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
3 | nsv1044370 | chr11:84748993-85293233 | Enhancers Weak transcription ZNF genes & repeats Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 22 gene(s) | inside rSNPs | diseases |
4 | nsv1052380 | chr11:84864551-84920320 | Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats | Chromatin interactive region | n/a | inside rSNPs | diseases |
5 | nsv898042 | chr11:84877221-84965437 | Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr11:84883200-84884000 | Weak transcription | HSMMtube | muscle |