Variant report

Variant	rs684114
Chromosome Location	chr1:84479639-84479640
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:84460505..84462859-chr1:84477477..84479738,2	K562	blood:

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs1811643	0.87[EUR][1000 genomes]
rs2182199	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2892811	0.87[EUR][1000 genomes]
rs471151	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs481354	0.95[EUR][1000 genomes]
rs484505	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs512737	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs522892	0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs523531	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs532246	0.95[EUR][1000 genomes]
rs562971	0.87[EUR][1000 genomes]
rs566830	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs575577	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs592905	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs593763	0.95[EUR][1000 genomes]
rs593869	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs602568	0.90[EUR][1000 genomes]
rs603447	0.94[EUR][1000 genomes]
rs615352	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs618232	0.90[EUR][1000 genomes]
rs625107	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs626376	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs629277	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs649226	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6576955	0.90[EUR][1000 genomes]
rs659227	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs659743	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs664508	0.94[EUR][1000 genomes]
rs6666984	0.90[EUR][1000 genomes]
rs667304	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs669110	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs671561	0.88[EUR][1000 genomes]
rs678794	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs680627	0.90[EUR][1000 genomes]
rs680905	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs683074	0.94[EUR][1000 genomes]
rs684651	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs726607	0.89[EUR][1000 genomes]
rs810915	0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:84474000-84484000	Weak transcription	Esophagus	oesophagus
2	chr1:84478800-84480600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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